Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148243484

Identifier: 148243484

GI number: 148243484

Start: 2080288

End: 2080641

Strand: Direct

Name: 148243484

Synonym: SynRCC307_2385

Alternate gene names: NA

Gene position: 2080288-2080641 (Clockwise)

Preceding gene: 148243483

Following gene: 148243485

Centisome position: 93.5

GC content: 64.41

Gene sequence:

>354_bases
ATGGAACTGGTCCGCGTCCGCACCACCTCAGCCCCTGGTCTGGGCCTCTGGTTGAAGACCCTGCGCAAGGGATTGAGCGG
CCAGGGCTACCGCGTTGAGGTGATCGATAACGGGCCGGTTCAGGTGTCGCTCAAGTCCACCCACCCCGACATTGAAGGGG
TGCTTTGTCTGGATGCCACGCTGCAAGCCGATCGCGAAGCCGGCGGGCTGGAGCTGCTGACCCGCTTGCAGTGGCGCGGC
GAGCCCGGCACCGATGAGACCCTGCAACAGATGCGTGATGTGGTCGCAGCCTTGGTGCCCAACGACAGCATCTTGAGCCT
GAGGGACTGCGCCTCCGAATTGGTAGCCGCCTGA

Upstream 100 bases:

>100_bases
CGCGGCTGTGAGCATCACGGTTGAGGCCTGAAGTCGCGGAGCGCACAGACAAAACAGGCTGCGACAGCTGAGGCTCATCT
CGAGCCATCGCAGCCTCACC

Downstream 100 bases:

>100_bases
GCCAGCCTCCAGCCACCGAAGTTCGGTCCTAGGTTTTATCCCCAGGAGCCATGAAACGGCAATGGTGGCGATCCAACCCA
GGCTGACGTTGCAGCAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MELVRVRTTSAPGLGLWLKTLRKGLSGQGYRVEVIDNGPVQVSLKSTHPDIEGVLCLDATLQADREAGGLELLTRLQWRG
EPGTDETLQQMRDVVAALVPNDSILSLRDCASELVAA

Sequences:

>Translated_117_residues
MELVRVRTTSAPGLGLWLKTLRKGLSGQGYRVEVIDNGPVQVSLKSTHPDIEGVLCLDATLQADREAGGLELLTRLQWRG
EPGTDETLQQMRDVVAALVPNDSILSLRDCASELVAA
>Mature_117_residues
MELVRVRTTSAPGLGLWLKTLRKGLSGQGYRVEVIDNGPVQVSLKSTHPDIEGVLCLDATLQADREAGGLELLTRLQWRG
EPGTDETLQQMRDVVAALVPNDSILSLRDCASELVAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12652; Mature: 12652

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELVRVRTTSAPGLGLWLKTLRKGLSGQGYRVEVIDNGPVQVSLKSTHPDIEGVLCLDAT
CCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCCCCEEEEECCC
LQADREAGGLELLTRLQWRGEPGTDETLQQMRDVVAALVPNDSILSLRDCASELVAA
HHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCC
>Mature Secondary Structure
MELVRVRTTSAPGLGLWLKTLRKGLSGQGYRVEVIDNGPVQVSLKSTHPDIEGVLCLDAT
CCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCCCCEEEEECCC
LQADREAGGLELLTRLQWRGEPGTDETLQQMRDVVAALVPNDSILSLRDCASELVAA
HHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA