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The map label for this gene is (hspc4-1 [H]

Identifier: 148243483

GI number: 148243483

Start: 2079826

End: 2080218

Strand: Direct

Name: (hspc4-1 [H]

Synonym: SynRCC307_2384

Alternate gene names: 148243483

Gene position: 2079826-2080218 (Clockwise)

Preceding gene: 148243482

Following gene: 148243484

Centisome position: 93.48

GC content: 62.09

Gene sequence:

>393_bases
ATGCTTTCCCGTCATGCCACCCCGTTCGATCTGTTTGAAAAGCTCGAGCAGCAGCTGGCCCAGGCCGAGCGCGTGCCTGC
CGCTGAAGTGATGGAAACCGACGCCGCCTTCCAAATCGCCGTTGAACTGCCTGGCGCCGCCAAGGACTCCATTGATGTCA
AAGCCACCGACCGCAGCCTGGTGATCAGTGCTGAGCGAGCTCAACCGGAGGGCGAACGCGATGGCGAACCCCTGGTCAGC
GAGTTTCGCTATGGCAGCTGGAGCCGCAGTTTCCGCTTCCCCAAAGGGATTCAACGCGATGAACTCAAGGCCAGCTACCG
CGATGGCCTGCTGCGCATCACCGCCCCCAAAGCGGAGAGCAACGCGGCTGTGAGCATCACGGTTGAGGCCTGA

Upstream 100 bases:

>100_bases
AAACGCCGGTTCTCCTCATCGCCGCAGCGAAGGAGGCGTCGAACACTGAGGTCAACGGGGCGGCAATCAGCCAGCCCCAC
CACCCCGTGAGGACACCACC

Downstream 100 bases:

>100_bases
AGTCGCGGAGCGCACAGACAAAACAGGCTGCGACAGCTGAGGCTCATCTCGAGCCATCGCAGCCTCACCATGGAACTGGT
CCGCGTCCGCACCACCTCAG

Product: molecular chaperone (small heat shock protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MLSRHATPFDLFEKLEQQLAQAERVPAAEVMETDAAFQIAVELPGAAKDSIDVKATDRSLVISAERAQPEGERDGEPLVS
EFRYGSWSRSFRFPKGIQRDELKASYRDGLLRITAPKAESNAAVSITVEA

Sequences:

>Translated_130_residues
MLSRHATPFDLFEKLEQQLAQAERVPAAEVMETDAAFQIAVELPGAAKDSIDVKATDRSLVISAERAQPEGERDGEPLVS
EFRYGSWSRSFRFPKGIQRDELKASYRDGLLRITAPKAESNAAVSITVEA
>Mature_130_residues
MLSRHATPFDLFEKLEQQLAQAERVPAAEVMETDAAFQIAVELPGAAKDSIDVKATDRSLVISAERAQPEGERDGEPLVS
EFRYGSWSRSFRFPKGIQRDELKASYRDGLLRITAPKAESNAAVSITVEA

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 14351; Mature: 14351

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRHATPFDLFEKLEQQLAQAERVPAAEVMETDAAFQIAVELPGAAKDSIDVKATDRSL
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCEE
VISAERAQPEGERDGEPLVSEFRYGSWSRSFRFPKGIQRDELKASYRDGLLRITAPKAES
EEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCC
NAAVSITVEA
CCEEEEEEEC
>Mature Secondary Structure
MLSRHATPFDLFEKLEQQLAQAERVPAAEVMETDAAFQIAVELPGAAKDSIDVKATDRSL
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCEE
VISAERAQPEGERDGEPLVSEFRYGSWSRSFRFPKGIQRDELKASYRDGLLRITAPKAES
EEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCC
NAAVSITVEA
CCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA