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The map label for this gene is yhdP [H]

Identifier: 148243405

GI number: 148243405

Start: 2003151

End: 2004452

Strand: Direct

Name: yhdP [H]

Synonym: SynRCC307_2306

Alternate gene names: 148243405

Gene position: 2003151-2004452 (Clockwise)

Preceding gene: 148243404

Following gene: 148243406

Centisome position: 90.03

GC content: 64.36

Gene sequence:

>1302_bases
ATGGGGCTTTCCCTGCGGTTGCTGACTCTGGTGTTGCTGTTGGCCTTGGTGGCCTTCTTTGCCGCCAGTGAATTTGCCTT
GATGCGGCTGCGGCCCACCCGGGTGCAGGAACTGGCCGAGCGCGGCAATGCGGCGGCACTAGCGATTGCACGCCTGCAGC
GGCATCTGCGCCGGGCTTTGCTGGCCACTCAACTGGGCTTGAGCCTGGCCCTATTGGCCCTCGGCTGGGGCAGCCACAGC
CTGCTCACCCTGCTGCATGGGCCCACACCTCCGGCCTGGCTGCAGCTGGTGGTGTTTGCGCTGCTCGCCCTGCTGGCCAC
CCTGCTGGGCGGATTGCTGCCCAAAGCCTGGGTGCTCGATGACCCGGAGAACGCAGCGCTGCGGCTTGGCCCCCTGCTCG
AATCGGTCAACCAAGCCCTAGCCCCGCTGCTGAGCGCGATTGAGGCCGTAGCCAACGTGCTGCTACGCGCCTTTGGACTA
CCGCTGCAATGGGACCGGCTGGTGCCATCGCTCTCAGCCAGTGAGCTCGAAAGCTTGATCGAGAACGACGCCGTCATTGG
CCTGGAGCCGGATGAGCGCAACATCCTTGAGGGGGTGTTCTCCCTGAGGGACACCCAGGTGCGCGAGGTGATGGTGCCCC
GCTCCGGGATGGTGACCTTGCCGCTGGAGGCCTGCCTCAGCGACCTGATGGAGGCGGTGGTCTCCACCCGCCATGCCCGC
TTCCCGGTGATTGGCGAATCACTCGATGATGTCCGCGGCCTACTGGATCTCCGCCTGCTGGCCGCACCGCTCGTCCGTGG
TGAACTAACCCTCGACTCTCCCTTGAGCCCGTACATCTGCCCGGTGGCCCGGATTCAAGAGAGTGCCTCCCTGGCCGATC
TGCTGCCCCAAATCCGCAGCGGGGAACCTGTACTGGTGGTGGTGGATGAACACGGCGGCACCGAAGGGCTGGTGACCATC
GCTGATCTCACCAGCGAAATCGTGGGCGATGAATTGGAAGATGACGGCGACGAGGCCGATCTGATTCCGCTGGGCGGCAA
CTGCTGGCGCGTGGCCGGTGATCTGGAGATTTTTGAGCTCAATCGCCAACTGGGGCTCAAGCTGCCGGAATCCGATGAAC
ACCACACCCTGGCTGGGTTTCTGCTCGAGCGACTGCAGCACATCCCCGCCGCTGGCGAGGCCCTCAACTGGGAGGGTGAC
CAATTCACGGTGCTGACGATGGACGGGCCCCGCATCGAGGACGTGAAGATCTGCCTCGGAGAACGCAGCAATGCGTTGAT
AATGAGCCCCCAGCAGGACTAG

Upstream 100 bases:

>100_bases
GATCCGTTGGCGCCCCTGCTGCAGCATCTGCACCGCAGCTGGCACAGCGCCACCGGCGACTCATAATTCAGCCATTCGCC
AGCTGGCATCCACAGAGTTC

Downstream 100 bases:

>100_bases
TCCCCTGCCTGCAACACCGCCCAGCTCACCAGGATGAAACCAGTCAAGGTGGGCGTGATCGGCATCGGCAACATGGGCTG
GAATCACGCCCGTGTGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MGLSLRLLTLVLLLALVAFFAASEFALMRLRPTRVQELAERGNAAALAIARLQRHLRRALLATQLGLSLALLALGWGSHS
LLTLLHGPTPPAWLQLVVFALLALLATLLGGLLPKAWVLDDPENAALRLGPLLESVNQALAPLLSAIEAVANVLLRAFGL
PLQWDRLVPSLSASELESLIENDAVIGLEPDERNILEGVFSLRDTQVREVMVPRSGMVTLPLEACLSDLMEAVVSTRHAR
FPVIGESLDDVRGLLDLRLLAAPLVRGELTLDSPLSPYICPVARIQESASLADLLPQIRSGEPVLVVVDEHGGTEGLVTI
ADLTSEIVGDELEDDGDEADLIPLGGNCWRVAGDLEIFELNRQLGLKLPESDEHHTLAGFLLERLQHIPAAGEALNWEGD
QFTVLTMDGPRIEDVKICLGERSNALIMSPQQD

Sequences:

>Translated_433_residues
MGLSLRLLTLVLLLALVAFFAASEFALMRLRPTRVQELAERGNAAALAIARLQRHLRRALLATQLGLSLALLALGWGSHS
LLTLLHGPTPPAWLQLVVFALLALLATLLGGLLPKAWVLDDPENAALRLGPLLESVNQALAPLLSAIEAVANVLLRAFGL
PLQWDRLVPSLSASELESLIENDAVIGLEPDERNILEGVFSLRDTQVREVMVPRSGMVTLPLEACLSDLMEAVVSTRHAR
FPVIGESLDDVRGLLDLRLLAAPLVRGELTLDSPLSPYICPVARIQESASLADLLPQIRSGEPVLVVVDEHGGTEGLVTI
ADLTSEIVGDELEDDGDEADLIPLGGNCWRVAGDLEIFELNRQLGLKLPESDEHHTLAGFLLERLQHIPAAGEALNWEGD
QFTVLTMDGPRIEDVKICLGERSNALIMSPQQD
>Mature_432_residues
GLSLRLLTLVLLLALVAFFAASEFALMRLRPTRVQELAERGNAAALAIARLQRHLRRALLATQLGLSLALLALGWGSHSL
LTLLHGPTPPAWLQLVVFALLALLATLLGGLLPKAWVLDDPENAALRLGPLLESVNQALAPLLSAIEAVANVLLRAFGLP
LQWDRLVPSLSASELESLIENDAVIGLEPDERNILEGVFSLRDTQVREVMVPRSGMVTLPLEACLSDLMEAVVSTRHARF
PVIGESLDDVRGLLDLRLLAAPLVRGELTLDSPLSPYICPVARIQESASLADLLPQIRSGEPVLVVVDEHGGTEGLVTIA
DLTSEIVGDELEDDGDEADLIPLGGNCWRVAGDLEIFELNRQLGLKLPESDEHHTLAGFLLERLQHIPAAGEALNWEGDQ
FTVLTMDGPRIEDVKICLGERSNALIMSPQQD

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=390, Percent_Identity=28.2051282051282, Blast_Score=164, Evalue=1e-40,
Organism=Escherichia coli, GI1790664, Length=438, Percent_Identity=25.7990867579909, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1786879, Length=271, Percent_Identity=30.9963099630996, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI145693175, Length=413, Percent_Identity=25.90799031477, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI87082033, Length=383, Percent_Identity=25.8485639686684, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1788119, Length=230, Percent_Identity=26.5217391304348, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 46827; Mature: 46696

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSLRLLTLVLLLALVAFFAASEFALMRLRPTRVQELAERGNAAALAIARLQRHLRRAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LATQLGLSLALLALGWGSHSLLTLLHGPTPPAWLQLVVFALLALLATLLGGLLPKAWVLD
HHHHHHHHHHHHHHCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
DPENAALRLGPLLESVNQALAPLLSAIEAVANVLLRAFGLPLQWDRLVPSLSASELESLI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHH
ENDAVIGLEPDERNILEGVFSLRDTQVREVMVPRSGMVTLPLEACLSDLMEAVVSTRHAR
HCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCC
FPVIGESLDDVRGLLDLRLLAAPLVRGELTLDSPLSPYICPVARIQESASLADLLPQIRS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCC
GEPVLVVVDEHGGTEGLVTIADLTSEIVGDELEDDGDEADLIPLGGNCWRVAGDLEIFEL
CCCEEEEEECCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEECCCEEEEE
NRQLGLKLPESDEHHTLAGFLLERLQHIPAAGEALNWEGDQFTVLTMDGPRIEDVKICLG
CHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHEEEC
ERSNALIMSPQQD
CCCCEEEECCCCC
>Mature Secondary Structure 
GLSLRLLTLVLLLALVAFFAASEFALMRLRPTRVQELAERGNAAALAIARLQRHLRRAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LATQLGLSLALLALGWGSHSLLTLLHGPTPPAWLQLVVFALLALLATLLGGLLPKAWVLD
HHHHHHHHHHHHHHCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
DPENAALRLGPLLESVNQALAPLLSAIEAVANVLLRAFGLPLQWDRLVPSLSASELESLI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHH
ENDAVIGLEPDERNILEGVFSLRDTQVREVMVPRSGMVTLPLEACLSDLMEAVVSTRHAR
HCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCC
FPVIGESLDDVRGLLDLRLLAAPLVRGELTLDSPLSPYICPVARIQESASLADLLPQIRS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCC
GEPVLVVVDEHGGTEGLVTIADLTSEIVGDELEDDGDEADLIPLGGNCWRVAGDLEIFEL
CCCEEEEEECCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEECCCEEEEE
NRQLGLKLPESDEHHTLAGFLLERLQHIPAAGEALNWEGDQFTVLTMDGPRIEDVKICLG
CHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHEEEC
ERSNALIMSPQQD
CCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]