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The map label for this gene is 148243399

Identifier: 148243399

GI number: 148243399

Start: 1998850

End: 2000289

Strand: Direct

Name: 148243399

Synonym: SynRCC307_2300

Alternate gene names: NA

Gene position: 1998850-2000289 (Clockwise)

Preceding gene: 148243391

Following gene: 148243402

Centisome position: 89.84

GC content: 65.97

Gene sequence:

>1440_bases
ATGGTGCATCCGCTCAGTGACCGCTTGCTGCGCAGCTGGCTGCGTTGCCGGCGCAAAGCCTGGCTGGATCGCCATGGGGA
TCCAGCCGAGCGGCTTTGGAACCCGCACCGCGCTCTGCAGCTGGCCGATCGCGAGAAGCGCTTGCAGCAATGCATTGATC
AGCCGCTCGAGCGCTGCACCGGCTTGGGGGCCCTGCAACGGGGCGAACCAGCGGTGCGTTTGTTGCTGCTGCGGCGCGAC
GGCATCTGCGGCCGGCCCACCTTGTTGCTGCGCAAACCGCAACCCAGCCAGCTGGGCACCTTCAGCTACCAGCCCGCACT
GCTGCAACCGGGTCGCCACGGCACCCGGGAGCACCGCCTCACCCTGGCGCTCTGGGGCTGGCTGCTGGAGCCGGTGCAAG
GCACTGCGGCCAGCCAGGGCTGGCTGATCAATCCCCGCGGACAACGCCAACGGCTCAATCTCCACAGCGGCCTCAACCAC
CAAATGCAAACCGCCTTGACGCGGCTGCAGCAGGACCTCAAACGCCGCAACCCGCCGCCACTGACCCACGACCGGCGCAA
ATGCACGCTCTGCAGCTGGCGCCGCAGCTGTGATGCGGTGGCCGAAGCACAAGGCGAACTGAGCACCGTGAGCGGCATTG
GCGGCAAACGCCAGGAACTGCTGCAAGAGCTGGGAATCGCGGATCGCCAAGCCCTCGCAGATACCCCAGGCGACTGGTTG
CTGCAACAGCTGGAGGAGCGCGGCATCCAACAACCGGAACTCGCCACCGAGCTGATTGCCCAAGCGATCGTTCAGCAGCG
CGGCATCGCCGAGCCGCTAAAGGCGGACAACCCCGACCCCTTACCCGAGCTCCATGGGGCACCCGGAGTGTTGCTCTACG
ACATCGAATCAGATCCCGATGCTCGAGACGATTTCCTGCATGGCTTTCTGCCCTTAAGCCGCGGGGCCGATGGCCGCTTT
GAAGACGCTGCCAGCGCCCCTTACCGGCCGATCCTGGCCTTGCGGGAGCACGGCGAAGATCGCCTCTGGCAGCGGCTGCA
ACGCCTGCTTGCCGCACACCCGGGCTGGCCGGTGCTGCACTACGGCGAAACCGAAGCGATCGCCTTAAAGCGGATGGCCG
AGCGCCAAAACAGCGAACCACCTCAAGGCTTGGTGGATTTGCACCAGCGCGTTCGGCAGCACTGGCGGCTGCCCGTCGAC
AGCTACGGCCTCAAAGCCGTGGCCAGCTGGCGGGGCTTTCGCTGGAGCCAACCCACCGCAGAAGGGGCCCGCTGCGTGTT
GTGGTGGCGCCAATGGCGTGAACGCCACCAGCGACACCAACTCGATCAAATCCTTCGCTACAACCGCGACGACTGCCTTG
CCACCTGGGCGGTGGCTCAGTGGCTGTCGAACGCTGCCGCCTCTGGCAACGACAACTTCAGCCCAGCAAGCTCCGATTGA

Upstream 100 bases:

>100_bases
CAGGCGCTGGCCAGCGAGCTCAAGCAACCAGCCATTGGCGCCGAAATAGGTGAGCTGCATGGCGAGTGGCCCAGGCGGAG
CACCCTTCTAGCTTGAATAG

Downstream 100 bases:

>100_bases
TCCCAGCAGCGGCGATGCAAGAGCAGCAGCCCGCGGCCCCCTCGGACTGAGGTCACCAGAGCGCCGCGCTCCCCGCTGGT
GGTGCGCAGCTGCTGACCTG

Product: RecB family nuclease

Products: NA

Alternate protein names: Nuclease; DNA Repair Protein

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MVHPLSDRLLRSWLRCRRKAWLDRHGDPAERLWNPHRALQLADREKRLQQCIDQPLERCTGLGALQRGEPAVRLLLLRRD
GICGRPTLLLRKPQPSQLGTFSYQPALLQPGRHGTREHRLTLALWGWLLEPVQGTAASQGWLINPRGQRQRLNLHSGLNH
QMQTALTRLQQDLKRRNPPPLTHDRRKCTLCSWRRSCDAVAEAQGELSTVSGIGGKRQELLQELGIADRQALADTPGDWL
LQQLEERGIQQPELATELIAQAIVQQRGIAEPLKADNPDPLPELHGAPGVLLYDIESDPDARDDFLHGFLPLSRGADGRF
EDAASAPYRPILALREHGEDRLWQRLQRLLAAHPGWPVLHYGETEAIALKRMAERQNSEPPQGLVDLHQRVRQHWRLPVD
SYGLKAVASWRGFRWSQPTAEGARCVLWWRQWRERHQRHQLDQILRYNRDDCLATWAVAQWLSNAAASGNDNFSPASSD

Sequences:

>Translated_479_residues
MVHPLSDRLLRSWLRCRRKAWLDRHGDPAERLWNPHRALQLADREKRLQQCIDQPLERCTGLGALQRGEPAVRLLLLRRD
GICGRPTLLLRKPQPSQLGTFSYQPALLQPGRHGTREHRLTLALWGWLLEPVQGTAASQGWLINPRGQRQRLNLHSGLNH
QMQTALTRLQQDLKRRNPPPLTHDRRKCTLCSWRRSCDAVAEAQGELSTVSGIGGKRQELLQELGIADRQALADTPGDWL
LQQLEERGIQQPELATELIAQAIVQQRGIAEPLKADNPDPLPELHGAPGVLLYDIESDPDARDDFLHGFLPLSRGADGRF
EDAASAPYRPILALREHGEDRLWQRLQRLLAAHPGWPVLHYGETEAIALKRMAERQNSEPPQGLVDLHQRVRQHWRLPVD
SYGLKAVASWRGFRWSQPTAEGARCVLWWRQWRERHQRHQLDQILRYNRDDCLATWAVAQWLSNAAASGNDNFSPASSD
>Mature_479_residues
MVHPLSDRLLRSWLRCRRKAWLDRHGDPAERLWNPHRALQLADREKRLQQCIDQPLERCTGLGALQRGEPAVRLLLLRRD
GICGRPTLLLRKPQPSQLGTFSYQPALLQPGRHGTREHRLTLALWGWLLEPVQGTAASQGWLINPRGQRQRLNLHSGLNH
QMQTALTRLQQDLKRRNPPPLTHDRRKCTLCSWRRSCDAVAEAQGELSTVSGIGGKRQELLQELGIADRQALADTPGDWL
LQQLEERGIQQPELATELIAQAIVQQRGIAEPLKADNPDPLPELHGAPGVLLYDIESDPDARDDFLHGFLPLSRGADGRF
EDAASAPYRPILALREHGEDRLWQRLQRLLAAHPGWPVLHYGETEAIALKRMAERQNSEPPQGLVDLHQRVRQHWRLPVD
SYGLKAVASWRGFRWSQPTAEGARCVLWWRQWRERHQRHQLDQILRYNRDDCLATWAVAQWLSNAAASGNDNFSPASSD

Specific function: Unknown

COG id: COG2251

COG function: function code R; Predicted nuclease (RecB family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54688; Mature: 54688

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHPLSDRLLRSWLRCRRKAWLDRHGDPAERLWNPHRALQLADREKRLQQCIDQPLERCT
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGALQRGEPAVRLLLLRRDGICGRPTLLLRKPQPSQLGTFSYQPALLQPGRHGTREHRL
CCCCCCCCCHHHEEHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCHHHHH
TLALWGWLLEPVQGTAASQGWLINPRGQRQRLNLHSGLNHQMQTALTRLQQDLKRRNPPP
HHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
LTHDRRKCTLCSWRRSCDAVAEAQGELSTVSGIGGKRQELLQELGIADRQALADTPGDWL
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCHHHHHCCCCHHHH
LQQLEERGIQQPELATELIAQAIVQQRGIAEPLKADNPDPLPELHGAPGVLLYDIESDPD
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCC
ARDDFLHGFLPLSRGADGRFEDAASAPYRPILALREHGEDRLWQRLQRLLAAHPGWPVLH
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEE
YGETEAIALKRMAERQNSEPPQGLVDLHQRVRQHWRLPVDSYGLKAVASWRGFRWSQPTA
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHCHHHHHHHCCCCCCCCCC
EGARCVLWWRQWRERHQRHQLDQILRYNRDDCLATWAVAQWLSNAAASGNDNFSPASSD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVHPLSDRLLRSWLRCRRKAWLDRHGDPAERLWNPHRALQLADREKRLQQCIDQPLERCT
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGALQRGEPAVRLLLLRRDGICGRPTLLLRKPQPSQLGTFSYQPALLQPGRHGTREHRL
CCCCCCCCCHHHEEHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCHHHHH
TLALWGWLLEPVQGTAASQGWLINPRGQRQRLNLHSGLNHQMQTALTRLQQDLKRRNPPP
HHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
LTHDRRKCTLCSWRRSCDAVAEAQGELSTVSGIGGKRQELLQELGIADRQALADTPGDWL
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCHHHHHCCCCHHHH
LQQLEERGIQQPELATELIAQAIVQQRGIAEPLKADNPDPLPELHGAPGVLLYDIESDPD
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCC
ARDDFLHGFLPLSRGADGRFEDAASAPYRPILALREHGEDRLWQRLQRLLAAHPGWPVLH
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEE
YGETEAIALKRMAERQNSEPPQGLVDLHQRVRQHWRLPVDSYGLKAVASWRGFRWSQPTA
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHCHHHHHHHCCCCCCCCCC
EGARCVLWWRQWRERHQRHQLDQILRYNRDDCLATWAVAQWLSNAAASGNDNFSPASSD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA