| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148243359
Identifier: 148243359
GI number: 148243359
Start: 1965761
End: 1966366
Strand: Direct
Name: 148243359
Synonym: SynRCC307_2260
Alternate gene names: NA
Gene position: 1965761-1966366 (Clockwise)
Preceding gene: 148243357
Following gene: 148243360
Centisome position: 88.35
GC content: 62.54
Gene sequence:
>606_bases ATGGTCGAGGTAGATCGGCGCAGCGGCCACGGAGGCTCCCCATCCAACGCAATCCATCCCATGCTGGCGGGACTCCGCTG GATTTCAGTGATGGTGCGCCCCGCCTGGCTGCTGGCAGCACTCGCCGGTCTGTTGAGCTCGAGTGCGGCACTGGCTCAGG GCTTTGTGTTTGAAACCAGGCAACAAAACCCAGCCAACTACCGCCCCCCTGGCCTGAAAATCCTGAGCCAGCGCACCGTT CCCTACGGCGAAGAAGTGGTGGGCATCTATGCCATTCGCGACGCCGAGGACATCCCCGATGGCAAGCGCATCAAGATTTG GCGTGAGCGCGCCAATGACGTCAAGGTCGCCAACGAAACCATCCGCTGCGACACCACCGCGCCGATGCGAATCACCGGCC GTGGCGACCAGATGCTGATGCTGGAACTCAACCCCGGTGGAGCCGTTGGGCCCCACAACGAGGAATCCCATCTGATCTGG TGGGCTGCCTGCGTGCCTGAGCAGACCGGCAACGACCCCAACACCCTTCAGGCGATCGCCCAAGAGCTGGGTTTCAGCGG GCTGCTGATCGAACGTCAGCATGTCTTGCCTGGACGCCCTCGATAA
Upstream 100 bases:
>100_bases GGCCAGGGCGGTGGCTGCGGCTGGAGGGATTGGCAAAGCCATCACTCCATAAGGGCGCCATGGCCTCCACCACCGCCGGA TCACAGGGCGTGGTGGCCTG
Downstream 100 bases:
>100_bases AGTCCAGGCGCTGCGTGTGATCTCTGCCCATGGATGGCTCTCAGGAGAAGGACCACGCCGAAGAACTGCTGAATGCCCCG CCGCGGGTGTTGCTGGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MVEVDRRSGHGGSPSNAIHPMLAGLRWISVMVRPAWLLAALAGLLSSSAALAQGFVFETRQQNPANYRPPGLKILSQRTV PYGEEVVGIYAIRDAEDIPDGKRIKIWRERANDVKVANETIRCDTTAPMRITGRGDQMLMLELNPGGAVGPHNEESHLIW WAACVPEQTGNDPNTLQAIAQELGFSGLLIERQHVLPGRPR
Sequences:
>Translated_201_residues MVEVDRRSGHGGSPSNAIHPMLAGLRWISVMVRPAWLLAALAGLLSSSAALAQGFVFETRQQNPANYRPPGLKILSQRTV PYGEEVVGIYAIRDAEDIPDGKRIKIWRERANDVKVANETIRCDTTAPMRITGRGDQMLMLELNPGGAVGPHNEESHLIW WAACVPEQTGNDPNTLQAIAQELGFSGLLIERQHVLPGRPR >Mature_201_residues MVEVDRRSGHGGSPSNAIHPMLAGLRWISVMVRPAWLLAALAGLLSSSAALAQGFVFETRQQNPANYRPPGLKILSQRTV PYGEEVVGIYAIRDAEDIPDGKRIKIWRERANDVKVANETIRCDTTAPMRITGRGDQMLMLELNPGGAVGPHNEESHLIW WAACVPEQTGNDPNTLQAIAQELGFSGLLIERQHVLPGRPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22059; Mature: 22059
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEVDRRSGHGGSPSNAIHPMLAGLRWISVMVRPAWLLAALAGLLSSSAALAQGFVFETR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEEECC QQNPANYRPPGLKILSQRTVPYGEEVVGIYAIRDAEDIPDGKRIKIWRERANDVKVANET CCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCEEECCCE IRCDTTAPMRITGRGDQMLMLELNPGGAVGPHNEESHLIWWAACVPEQTGNDPNTLQAIA EEECCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHH QELGFSGLLIERQHVLPGRPR HHHCCCCEEEEECCCCCCCCC >Mature Secondary Structure MVEVDRRSGHGGSPSNAIHPMLAGLRWISVMVRPAWLLAALAGLLSSSAALAQGFVFETR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEEECC QQNPANYRPPGLKILSQRTVPYGEEVVGIYAIRDAEDIPDGKRIKIWRERANDVKVANET CCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCEEECCCE IRCDTTAPMRITGRGDQMLMLELNPGGAVGPHNEESHLIWWAACVPEQTGNDPNTLQAIA EEECCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHH QELGFSGLLIERQHVLPGRPR HHHCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA