| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is actP [H]
Identifier: 148243283
GI number: 148243283
Start: 1895229
End: 1896872
Strand: Direct
Name: actP [H]
Synonym: SynRCC307_2184
Alternate gene names: 148243283
Gene position: 1895229-1896872 (Clockwise)
Preceding gene: 148243282
Following gene: 148243284
Centisome position: 85.18
GC content: 59.43
Gene sequence:
>1644_bases TTGAAAGCAGACGCTTTGGCCGTGCTTTTTGCCATCTCCAACAGCGTGCTCGGCGATGCCATCGGCGGGAGCCTGGTGGA ATCGGCGTTGATGTTTTGGGAAACCCTTTGGCCCTTGGTATTGGGCTTCGGGATTGCCGGCCTCGTTCAGGCCTGCGCCA GCCGCGATGGCATGGAAAAGGTGCTGGGCAATCACCGTGCCGGAGCGATTAGCCGCGCCGCTGGCTACGGCATGTTGTCG TCCTCGTGCTCCTACGCCGCCTCGGCGATGACCAAAAATCTGGTGGTCAAAGGGGCTGATTTCATCACAGCCATGGTGTT CATGGTGGCCTCCACCAATCTGGTCATTGAGATCGGATTGGTGCTGATTGCCCTCATGGGATGGCAGTTCGCCGTGGCGG AATTTGTCGGCGGGCCGATCATGATCGTGCTGCTGGCCCTACTGGGAACCCTTCTCTTCCCGGCCGTAGTCACCCGCCCA GCACAGCAACGGCTGCAACGCAAAAGCGCCTCCCAAGACGCCCCGACAGAGACCTCCCAAACGTCTGTGGGCCTCGCCAA AAGGCTGCGTACACCTGCCACGTGGGCCAACGCCGCCAGCTACACCCTGGCCGACCTGACCATGCTGCGCAAAGAGCTGC TGATCGGCTTTCTGGTTGCCGGTGCCCTCACCAGCTTTGTTCCTGATGCCACCTGGGAGGTGGTTTTTGCCCAGGGCCAT GGCCTCTGGACATCAGTTCAGAACGCCTTCATCGGCCCACTGATCGCCGTAATCAGCTTTGTCTGCTCCGTTGGCAATGT GGCCTTGGCCGCATCGCTCTGGCAGGGAGGCATTTCCTTTGGTGGGGTGGTGGCCTTCATCTTTGGCGATCTGATCACGC TCCCTCTGCTGCTGATCTACCGCAAGTACTACGGCCCACAGTTAGCCCTGCGCATGTGGTTGGGCCTGTGGCTGGTGATG TCAGTCAGTGGGCTGCTGGTGGAGTTGATCTTCAGCCACATCGGCCTGGTCCCTGCGGTGCGTCAAACCGCTACCGCCCA GGCAAGCTTTGCGTGGAACAGCACCACCTGGCTCAACCTTGTGGCCATCGCCGCCCTAGTCGGTGCCTCCTGGCTGGCTC ACCACAAAGAACGCTTTGGAGGCGGCAGCGGCTACGCCATTGATCCGATCTGCGGCATGCAAGTGGAAATTGCCAATGCC CCAGCCCATCGCTGCAAAAATCACACCGACTACTGGTTCTGCTCCGATCACTGCGCTGAGAAATTCGACAAGGCAGGAGC CCCAAAGTCCACGCCTCAGCGACATAAGAGCGTTCCAACCGCCAAGACCTCATCCTGCAAAGACCCGGTTTGCGGCATGG ACGTTGATCCAGCCACGGCCAAAGTCAGCCGTACCTATGGGGGCACCACAGTAATTTTCTGCGGCAACCACTGTGCTGAG AAATTCGATGAAAACCCAACGAAGTACTGCCAGCCCAGTGCCGATTGCAAGGATCCGGTCTGCGGCATGAGCGTTGATCC AGCCACCGCCAAAGTCAGCCGCACCTACAGCGGCACCACAGTGTTTTTCTGCGGCAACCACTGCGGTGACAAATTCGACC AGGACCCTGAGCGTTATCTCAAAACGGAGGGCAGCCACGCTTAA
Upstream 100 bases:
>100_bases AAACGATTCAGATCAACTGAATCGGAAAGCCCCCTCCTCGGAGGGGGCTTTTTGTTGTGCGGATGCAGGCTGAATCCAAG CTGGCTATCTGTGGGAGGCG
Downstream 100 bases:
>100_bases TTGGACTGAGTGAAGCGAGGCAACCCATGCCAGAGGAAGACCCGACGCTTCAATTTGAACTGAATGAGGAAGCCATTGGG CTGATGCTGAAGTCGGTGAG
Product: permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MKADALAVLFAISNSVLGDAIGGSLVESALMFWETLWPLVLGFGIAGLVQACASRDGMEKVLGNHRAGAISRAAGYGMLS SSCSYAASAMTKNLVVKGADFITAMVFMVASTNLVIEIGLVLIALMGWQFAVAEFVGGPIMIVLLALLGTLLFPAVVTRP AQQRLQRKSASQDAPTETSQTSVGLAKRLRTPATWANAASYTLADLTMLRKELLIGFLVAGALTSFVPDATWEVVFAQGH GLWTSVQNAFIGPLIAVISFVCSVGNVALAASLWQGGISFGGVVAFIFGDLITLPLLLIYRKYYGPQLALRMWLGLWLVM SVSGLLVELIFSHIGLVPAVRQTATAQASFAWNSTTWLNLVAIAALVGASWLAHHKERFGGGSGYAIDPICGMQVEIANA PAHRCKNHTDYWFCSDHCAEKFDKAGAPKSTPQRHKSVPTAKTSSCKDPVCGMDVDPATAKVSRTYGGTTVIFCGNHCAE KFDENPTKYCQPSADCKDPVCGMSVDPATAKVSRTYSGTTVFFCGNHCGDKFDQDPERYLKTEGSHA
Sequences:
>Translated_547_residues MKADALAVLFAISNSVLGDAIGGSLVESALMFWETLWPLVLGFGIAGLVQACASRDGMEKVLGNHRAGAISRAAGYGMLS SSCSYAASAMTKNLVVKGADFITAMVFMVASTNLVIEIGLVLIALMGWQFAVAEFVGGPIMIVLLALLGTLLFPAVVTRP AQQRLQRKSASQDAPTETSQTSVGLAKRLRTPATWANAASYTLADLTMLRKELLIGFLVAGALTSFVPDATWEVVFAQGH GLWTSVQNAFIGPLIAVISFVCSVGNVALAASLWQGGISFGGVVAFIFGDLITLPLLLIYRKYYGPQLALRMWLGLWLVM SVSGLLVELIFSHIGLVPAVRQTATAQASFAWNSTTWLNLVAIAALVGASWLAHHKERFGGGSGYAIDPICGMQVEIANA PAHRCKNHTDYWFCSDHCAEKFDKAGAPKSTPQRHKSVPTAKTSSCKDPVCGMDVDPATAKVSRTYGGTTVIFCGNHCAE KFDENPTKYCQPSADCKDPVCGMSVDPATAKVSRTYSGTTVFFCGNHCGDKFDQDPERYLKTEGSHA >Mature_547_residues MKADALAVLFAISNSVLGDAIGGSLVESALMFWETLWPLVLGFGIAGLVQACASRDGMEKVLGNHRAGAISRAAGYGMLS SSCSYAASAMTKNLVVKGADFITAMVFMVASTNLVIEIGLVLIALMGWQFAVAEFVGGPIMIVLLALLGTLLFPAVVTRP AQQRLQRKSASQDAPTETSQTSVGLAKRLRTPATWANAASYTLADLTMLRKELLIGFLVAGALTSFVPDATWEVVFAQGH GLWTSVQNAFIGPLIAVISFVCSVGNVALAASLWQGGISFGGVVAFIFGDLITLPLLLIYRKYYGPQLALRMWLGLWLVM SVSGLLVELIFSHIGLVPAVRQTATAQASFAWNSTTWLNLVAIAALVGASWLAHHKERFGGGSGYAIDPICGMQVEIANA PAHRCKNHTDYWFCSDHCAEKFDKAGAPKSTPQRHKSVPTAKTSSCKDPVCGMDVDPATAKVSRTYGGTTVIFCGNHCAE KFDENPTKYCQPSADCKDPVCGMSVDPATAKVSRTYSGTTVFFCGNHCGDKFDQDPERYLKTEGSHA
Specific function: Involved in copper efflux [H]
COG id: COG0701
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006403 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR009078 - InterPro: IPR023214 - InterPro: IPR011017 - InterPro: IPR007029 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00702 Hydrolase; PF04945 YHS [H]
EC number: =3.6.3.4 [H]
Molecular weight: Translated: 58276; Mature: 58276
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKADALAVLFAISNSVLGDAIGGSLVESALMFWETLWPLVLGFGIAGLVQACASRDGMEK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VLGNHRAGAISRAAGYGMLSSSCSYAASAMTKNLVVKGADFITAMVFMVASTNLVIEIGL HHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH VLIALMGWQFAVAEFVGGPIMIVLLALLGTLLFPAVVTRPAQQRLQRKSASQDAPTETSQ HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCH TSVGLAKRLRTPATWANAASYTLADLTMLRKELLIGFLVAGALTSFVPDATWEVVFAQGH HHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC GLWTSVQNAFIGPLIAVISFVCSVGNVALAASLWQGGISFGGVVAFIFGDLITLPLLLIY CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RKYYGPQLALRMWLGLWLVMSVSGLLVELIFSHIGLVPAVRQTATAQASFAWNSTTWLNL HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHH VAIAALVGASWLAHHKERFGGGSGYAIDPICGMQVEIANAPAHRCKNHTDYWFCSDHCAE HHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCEEEECCCCHHHCCCCCCEEEECHHHHH KFDKAGAPKSTPQRHKSVPTAKTSSCKDPVCGMDVDPATAKVSRTYGGTTVIFCGNHCAE HHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCHHHH KFDENPTKYCQPSADCKDPVCGMSVDPATAKVSRTYSGTTVFFCGNHCGDKFDQDPERYL HHCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHEECCCCCEEEEECCCCCCCCCCCHHHHH KTEGSHA HCCCCCC >Mature Secondary Structure MKADALAVLFAISNSVLGDAIGGSLVESALMFWETLWPLVLGFGIAGLVQACASRDGMEK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VLGNHRAGAISRAAGYGMLSSSCSYAASAMTKNLVVKGADFITAMVFMVASTNLVIEIGL HHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH VLIALMGWQFAVAEFVGGPIMIVLLALLGTLLFPAVVTRPAQQRLQRKSASQDAPTETSQ HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCH TSVGLAKRLRTPATWANAASYTLADLTMLRKELLIGFLVAGALTSFVPDATWEVVFAQGH HHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC GLWTSVQNAFIGPLIAVISFVCSVGNVALAASLWQGGISFGGVVAFIFGDLITLPLLLIY CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RKYYGPQLALRMWLGLWLVMSVSGLLVELIFSHIGLVPAVRQTATAQASFAWNSTTWLNL HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHH VAIAALVGASWLAHHKERFGGGSGYAIDPICGMQVEIANAPAHRCKNHTDYWFCSDHCAE HHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCEEEECCCCHHHCCCCCCEEEECHHHHH KFDKAGAPKSTPQRHKSVPTAKTSSCKDPVCGMDVDPATAKVSRTYGGTTVIFCGNHCAE HHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCHHHH KFDENPTKYCQPSADCKDPVCGMSVDPATAKVSRTYSGTTVFFCGNHCGDKFDQDPERYL HHCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHEECCCCCEEEEECCCCCCCCCCCHHHHH KTEGSHA HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11936079 [H]