Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is psaL [H]

Identifier: 148243253

GI number: 148243253

Start: 1854183

End: 1854674

Strand: Direct

Name: psaL [H]

Synonym: SynRCC307_2154

Alternate gene names: 148243253

Gene position: 1854183-1854674 (Clockwise)

Preceding gene: 148243252

Following gene: 148243254

Centisome position: 83.34

GC content: 62.4

Gene sequence:

>492_bases
ATGACTGTGACTCCCGCCGCCGACCCCTGCGTCGGCAACCTCGCCACACCGGTGAACAGCGGCTATTTCATCAAAGCCCT
GATCAACAACCTGCCCTTCTATCGGGCTGGCATCTCACCGAACTTCCGTGGTCTTGAGACCGGTGCCGCCTTCGGCTACC
TGCTCTACGGCCCCTTCACCATCTGCGGCCCCCTGCGCAACAGCGAGTTTTCAGCAACCGCTGGCCTGCTGGCTGCAATC
GGAGCGGTGCACATCCTCACGCTGCTGTTCCTGCTCTACAACCAGCCCGGCAAGCAGCCCCACATCCCCATGGCGGATGT
GACCATCGACAATCCTCCCGCTGATCTGTTCACCCGCACCGGCTGGGCTGACTTCACCAGCGGCTTCTGGCTTGGTGGTT
GCGGCGGCGCTGTCTTTGCTTGGTTCCTCTGCGGCACCCTGCACGTCAACACCCTGCTGAATCTTGCCGGTGGCGTTTGG
AGCGTTGGCTGA

Upstream 100 bases:

>100_bases
TTTTCCCTGCGGTGTTCATCGTTCTGGTTGGAAGCCAAATCACCGCCAGCGAGTGACGGCCCCTGGCCTTTGACCGCCAA
CTGAACATTCCTTTCCACTC

Downstream 100 bases:

>100_bases
AGCCAACTGCTTTCTCTGACATCCCAAGCCCCTGCCTCGGCGGGGGCTTTTTTAATGGCAAGATCCCTCACACCAGGGGC
CAGAACAGCGCTCGATGTCG

Product: photosystem I reaction center protein subunit XI

Products: NA

Alternate protein names: PSI subunit V; PSI-L [H]

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MTVTPAADPCVGNLATPVNSGYFIKALINNLPFYRAGISPNFRGLETGAAFGYLLYGPFTICGPLRNSEFSATAGLLAAI
GAVHILTLLFLLYNQPGKQPHIPMADVTIDNPPADLFTRTGWADFTSGFWLGGCGGAVFAWFLCGTLHVNTLLNLAGGVW
SVG

Sequences:

>Translated_163_residues
MTVTPAADPCVGNLATPVNSGYFIKALINNLPFYRAGISPNFRGLETGAAFGYLLYGPFTICGPLRNSEFSATAGLLAAI
GAVHILTLLFLLYNQPGKQPHIPMADVTIDNPPADLFTRTGWADFTSGFWLGGCGGAVFAWFLCGTLHVNTLLNLAGGVW
SVG
>Mature_162_residues
TVTPAADPCVGNLATPVNSGYFIKALINNLPFYRAGISPNFRGLETGAAFGYLLYGPFTICGPLRNSEFSATAGLLAAIG
AVHILTLLFLLYNQPGKQPHIPMADVTIDNPPADLFTRTGWADFTSGFWLGGCGGAVFAWFLCGTLHVNTLLNLAGGVWS
VG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psaL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003757
- InterPro:   IPR022980
- ProDom:   PD005947 [H]

Pfam domain/function: PF02605 PsaL [H]

EC number: NA

Molecular weight: Translated: 17197; Mature: 17066

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTPAADPCVGNLATPVNSGYFIKALINNLPFYRAGISPNFRGLETGAAFGYLLYGPFT
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHCCHH
ICGPLRNSEFSATAGLLAAIGAVHILTLLFLLYNQPGKQPHIPMADVTIDNPPADLFTRT
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHCC
GWADFTSGFWLGGCGGAVFAWFLCGTLHVNTLLNLAGGVWSVG
CCCHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TVTPAADPCVGNLATPVNSGYFIKALINNLPFYRAGISPNFRGLETGAAFGYLLYGPFT
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHCCHH
ICGPLRNSEFSATAGLLAAIGAVHILTLLFLLYNQPGKQPHIPMADVTIDNPPADLFTRT
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHCC
GWADFTSGFWLGGCGGAVFAWFLCGTLHVNTLLNLAGGVWSVG
CCCHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA