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The map label for this gene is arnC [H]

Identifier: 148243250

GI number: 148243250

Start: 1852530

End: 1853507

Strand: Direct

Name: arnC [H]

Synonym: SynRCC307_2151

Alternate gene names: 148243250

Gene position: 1852530-1853507 (Clockwise)

Preceding gene: 148243249

Following gene: 148243252

Centisome position: 83.26

GC content: 61.15

Gene sequence:

>978_bases
GTGACCCTTTCTGTGGTGATCCCCCTCTACAACGAAGAGGAGAGCCTCTCGATGCTCGTGGCTCAGCTGCTCGGCAGCCT
GAGGCCTTTGGGGGAACCCTTTGAATTGGTCTTGGTGGATGACGGCTCTAGCGACCGCACCGCTGAATTACTGCAAGAGC
TAAGCCGCACCACACCCGAACTGGTGGCTGTGTTGCTGCGCCGAAACTACGGCCAAACCGCCGCCATGGCCGCTGGTTTT
GATGCCTGCCGCGGCGATGAGATCGTCACCCTTGATGGGGATCTGCAGAACGATCCAGCGGACATCCCCATGATCGTGGA
GAAGCTGCGCCAGGGCTACGACCTGGTGAGTGGCTGGCGCCACCAGCGCCAAGACGCGGCCATCAGCCGTTTGCTGCCAT
CGAAGCTGGCCAACAAGTTGATTGCCCGGGTCACCGGGGTGCGGCTGCACGACTACGGCTGCTCACTCAAGGCCTACCGC
CGCGAGTTGGTGACCGACATGAACCTCTACGGAGAGCTGCATCGCTTCCTGCCAGCACTGGCCTACATCGAGGGCGCCCG
CATCAGTGAAGTGAAGGTGAACCACAAAGCTCGCCAGTTTGGCGAAAGCAAATACGGCATCGACCGCACCTTCCGGGTGC
TGATGGATCTGCTCACCGTGTGGTTCATGAAGCGCTTCCTGACCCGTCCCATGCACGTATTTGGCTTCTGGGGCCTGATG
GCCCTCGTGGCTGGCGGCCTAATGGGCAGCGTGTTGGTGGTTCAAAAGCTGCTGGGCGCTGATATCGGCACACGGCCGCT
CCTCACCCTCTGCGTGCTGCTGCTGCTCACCGGGGTTCAACTGTTCTGCTTCGGACTGCTGGCTGAAGTGATGATGCGCA
CCTATCACGAAAGCCAAGGGCGGCCGATCTACCGCATCCGCGCCACGTTGCGAGGTAGCGAAGCCTTGCCTGAGCCGGCG
GTTGCTGCATTGCGATAA

Upstream 100 bases:

>100_bases
CAAAAGCCCAGTGGCCACCCACTACCGCATGGAATTGCGGGGTGCTGGCAGAGTGCAGCGCTGCCACGATGGCAGCCACC
TTCCCTGAGTCCAGACGGCC

Downstream 100 bases:

>100_bases
CCACCGAGAGGTTCACCCCGAAACGCTTCCAAAGCGCAAGCTGCTTGGCGAGCGACAGCAACGGTGGCATCGCGCTGACC
GCGGCGCAGCAGCGGCAAAC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MTLSVVIPLYNEEESLSMLVAQLLGSLRPLGEPFELVLVDDGSSDRTAELLQELSRTTPELVAVLLRRNYGQTAAMAAGF
DACRGDEIVTLDGDLQNDPADIPMIVEKLRQGYDLVSGWRHQRQDAAISRLLPSKLANKLIARVTGVRLHDYGCSLKAYR
RELVTDMNLYGELHRFLPALAYIEGARISEVKVNHKARQFGESKYGIDRTFRVLMDLLTVWFMKRFLTRPMHVFGFWGLM
ALVAGGLMGSVLVVQKLLGADIGTRPLLTLCVLLLLTGVQLFCFGLLAEVMMRTYHESQGRPIYRIRATLRGSEALPEPA
VAALR

Sequences:

>Translated_325_residues
MTLSVVIPLYNEEESLSMLVAQLLGSLRPLGEPFELVLVDDGSSDRTAELLQELSRTTPELVAVLLRRNYGQTAAMAAGF
DACRGDEIVTLDGDLQNDPADIPMIVEKLRQGYDLVSGWRHQRQDAAISRLLPSKLANKLIARVTGVRLHDYGCSLKAYR
RELVTDMNLYGELHRFLPALAYIEGARISEVKVNHKARQFGESKYGIDRTFRVLMDLLTVWFMKRFLTRPMHVFGFWGLM
ALVAGGLMGSVLVVQKLLGADIGTRPLLTLCVLLLLTGVQLFCFGLLAEVMMRTYHESQGRPIYRIRATLRGSEALPEPA
VAALR
>Mature_324_residues
TLSVVIPLYNEEESLSMLVAQLLGSLRPLGEPFELVLVDDGSSDRTAELLQELSRTTPELVAVLLRRNYGQTAAMAAGFD
ACRGDEIVTLDGDLQNDPADIPMIVEKLRQGYDLVSGWRHQRQDAAISRLLPSKLANKLIARVTGVRLHDYGCSLKAYRR
ELVTDMNLYGELHRFLPALAYIEGARISEVKVNHKARQFGESKYGIDRTFRVLMDLLTVWFMKRFLTRPMHVFGFWGLMA
LVAGGLMGSVLVVQKLLGADIGTRPLLTLCVLLLLTGVQLFCFGLLAEVMMRTYHESQGRPIYRIRATLRGSEALPEPAV
AALR

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=231, Percent_Identity=29.004329004329, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI1788588, Length=319, Percent_Identity=39.8119122257053, Blast_Score=218, Evalue=4e-58,
Organism=Escherichia coli, GI1788692, Length=308, Percent_Identity=25.6493506493506, Blast_Score=125, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI71999402, Length=216, Percent_Identity=28.2407407407407, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24585265, Length=230, Percent_Identity=26.5217391304348, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 36275; Mature: 36144

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSVVIPLYNEEESLSMLVAQLLGSLRPLGEPFELVLVDDGSSDRTAELLQELSRTTPE
CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHH
LVAVLLRRNYGQTAAMAAGFDACRGDEIVTLDGDLQNDPADIPMIVEKLRQGYDLVSGWR
HHHHHHHHCCCCHHHHHHCCHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
HQRQDAAISRLLPSKLANKLIARVTGVRLHDYGCSLKAYRRELVTDMNLYGELHRFLPAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AYIEGARISEVKVNHKARQFGESKYGIDRTFRVLMDLLTVWFMKRFLTRPMHVFGFWGLM
HHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
ALVAGGLMGSVLVVQKLLGADIGTRPLLTLCVLLLLTGVQLFCFGLLAEVMMRTYHESQG
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RPIYRIRATLRGSEALPEPAVAALR
CEEEEHHHHHCCCCCCCCCHHHHCC
>Mature Secondary Structure 
TLSVVIPLYNEEESLSMLVAQLLGSLRPLGEPFELVLVDDGSSDRTAELLQELSRTTPE
CEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHH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CEEEEHHHHHCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA