| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is mpeV [H]
Identifier: 148243155
GI number: 148243155
Start: 1780311
End: 1781225
Strand: Direct
Name: mpeV [H]
Synonym: SynRCC307_2056
Alternate gene names: 148243155
Gene position: 1780311-1781225 (Clockwise)
Preceding gene: 148243153
Following gene: 148243158
Centisome position: 80.02
GC content: 51.91
Gene sequence:
>915_bases ATGCCGGATCAACGTGAGTTGAGCTCACCAAGCATGGTGATTGGAGAGCAGCAAGAGATCCGACTGAGCGAAGAGGAAGC TTACGATCTCGCAGCACATCTCAAGCAAAGGCTTCAAGAAGGAACGCCCCTGGATGCTGATCCAGACTCCATTGCAAAGA TGGTTGCTGGCCTTGGTGATCCCAGAGGTCTTTTACGCCTGCGTTTTGCCGACAGCCTTGGCAATGTAGGACGAGCTGCA GTGCCTGCGCTTTGCCAGGCCATGCAGCCCAGTAATCAGGTCACCGTTCGCCGAGCAGCCGCGAAGACTCTGACTCTGAT TGCCGACGAGCAAAGCATCCCCGATCTACTGAATTCACTACTCACGGATCCTGATTCCGTTGTTCAGGGATCAGCGATGG GAGCCTTGGCTGCGATTGGAGCTCCTGCTGTAGAGGCGGTTTTCAGCATTCTTGAGAATCCAGATAGCAGCGAAATGCAG CGGGGTTTGGCCAATTGGGCTCTTGCATTCATCGGAGACAAGGCTCCTGACTCACTACGTGCAGCTGCTATTTCAACAAA TCCTGATATCCGGCAAGCAGCGATTGCGGCACTTGGCAGCCAGATTCAATCCATGGGAGATGAGCAAGCTCGTGAGCTTC TAACCAATGCCTTGAATGATCCCATTTCAAATGTTCGAGCCGAGGCAGCAACACTGCTTGGCAAACTTCAAGATTCTGAG TGGGCGGCGCCATTACTCATTCCTAAATTAAACGATGAGGACAGTTGGGTCAGAAAGAACTCGGCCTTGTCTTTGATGAA ACTCGATGCCATCAGCGCTATCCAAGATCTCAGCCAGTGCGCAGAACAAGAGTCAGATTCTGTCGTCAAGGCCGTGATGA CACTCGCCATTAAACAGATCGAGAAGAACAACTAA
Upstream 100 bases:
>100_bases GATGACAATTGAAGATTGTGGGAAAGAACAAAAACCGTCATCGTCACAAGCTAGGGTCGTTGAAGGCCATCCTTGGCCAC GCTCACCGTTTCTAACAAAC
Downstream 100 bases:
>100_bases ATAGCGCTTTGATTTGGGCTGCCTAACAAACTAATCAGGCTGAACAGATTGGTCTGATTTCATGCGCTTGGTCGAGCAAC ATACAAAAAAAGGGGGCTTG
Product: bilin biosynthesis protein MpeV
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MPDQRELSSPSMVIGEQQEIRLSEEEAYDLAAHLKQRLQEGTPLDADPDSIAKMVAGLGDPRGLLRLRFADSLGNVGRAA VPALCQAMQPSNQVTVRRAAAKTLTLIADEQSIPDLLNSLLTDPDSVVQGSAMGALAAIGAPAVEAVFSILENPDSSEMQ RGLANWALAFIGDKAPDSLRAAAISTNPDIRQAAIAALGSQIQSMGDEQARELLTNALNDPISNVRAEAATLLGKLQDSE WAAPLLIPKLNDEDSWVRKNSALSLMKLDAISAIQDLSQCAEQESDSVVKAVMTLAIKQIEKNN
Sequences:
>Translated_304_residues MPDQRELSSPSMVIGEQQEIRLSEEEAYDLAAHLKQRLQEGTPLDADPDSIAKMVAGLGDPRGLLRLRFADSLGNVGRAA VPALCQAMQPSNQVTVRRAAAKTLTLIADEQSIPDLLNSLLTDPDSVVQGSAMGALAAIGAPAVEAVFSILENPDSSEMQ RGLANWALAFIGDKAPDSLRAAAISTNPDIRQAAIAALGSQIQSMGDEQARELLTNALNDPISNVRAEAATLLGKLQDSE WAAPLLIPKLNDEDSWVRKNSALSLMKLDAISAIQDLSQCAEQESDSVVKAVMTLAIKQIEKNN >Mature_303_residues PDQRELSSPSMVIGEQQEIRLSEEEAYDLAAHLKQRLQEGTPLDADPDSIAKMVAGLGDPRGLLRLRFADSLGNVGRAAV PALCQAMQPSNQVTVRRAAAKTLTLIADEQSIPDLLNSLLTDPDSVVQGSAMGALAAIGAPAVEAVFSILENPDSSEMQR GLANWALAFIGDKAPDSLRAAAISTNPDIRQAAIAALGSQIQSMGDEQARELLTNALNDPISNVRAEAATLLGKLQDSEW AAPLLIPKLNDEDSWVRKNSALSLMKLDAISAIQDLSQCAEQESDSVVKAVMTLAIKQIEKNN
Specific function: An enzyme involved in the biosynthesis of bilin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CpcE/RpcE/PecE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011989 - InterPro: IPR016024 - InterPro: IPR004155 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32369; Mature: 32238
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDQRELSSPSMVIGEQQEIRLSEEEAYDLAAHLKQRLQEGTPLDADPDSIAKMVAGLGD CCCCCCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC PRGLLRLRFADSLGNVGRAAVPALCQAMQPSNQVTVRRAAAKTLTLIADEQSIPDLLNSL CHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH LTDPDSVVQGSAMGALAAIGAPAVEAVFSILENPDSSEMQRGLANWALAFIGDKAPDSLR HCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHH AAAISTNPDIRQAAIAALGSQIQSMGDEQARELLTNALNDPISNVRAEAATLLGKLQDSE HHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC WAAPLLIPKLNDEDSWVRKNSALSLMKLDAISAIQDLSQCAEQESDSVVKAVMTLAIKQI CCCCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKNN HCCC >Mature Secondary Structure PDQRELSSPSMVIGEQQEIRLSEEEAYDLAAHLKQRLQEGTPLDADPDSIAKMVAGLGD CCCCCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC PRGLLRLRFADSLGNVGRAAVPALCQAMQPSNQVTVRRAAAKTLTLIADEQSIPDLLNSL CHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH LTDPDSVVQGSAMGALAAIGAPAVEAVFSILENPDSSEMQRGLANWALAFIGDKAPDSLR HCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHH AAAISTNPDIRQAAIAALGSQIQSMGDEQARELLTNALNDPISNVRAEAATLLGKLQDSE HHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC WAAPLLIPKLNDEDSWVRKNSALSLMKLDAISAIQDLSQCAEQESDSVVKAVMTLAIKQI CCCCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKNN HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8425055; 8419325 [H]