| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148243125
Identifier: 148243125
GI number: 148243125
Start: 1757236
End: 1758324
Strand: Direct
Name: 148243125
Synonym: SynRCC307_2026
Alternate gene names: NA
Gene position: 1757236-1758324 (Clockwise)
Preceding gene: 148243124
Following gene: 148243126
Centisome position: 78.98
GC content: 61.98
Gene sequence:
>1089_bases GTGAATCAGTCCTTGTCTTCGCTTGCGCGTCTGACTCTCCGACAACTGCGCCGCGTTGCAAGCGACCTGGGTGTGGCTCT TTACAGCCGCAAATCAAAGGACGAGCTGCTCGATGCCATCAGCACAAAGCAGGAGTTCAGCGCTGGCGAGAAGCGCATTG AAACCGCCATCTCCTTAGCCGAGATGGAGGCTGGTTTTGGCAACACCCCCCTGCCTCTACCTGAAACTCGGGTGGTTTTT CTCCCCCGTGATCCCCAATGGGCCTACGTCTTTTGGGAGATCGCTGCTGACAGCCGTCGCTCTGCTGAGGCCGCTGGTGC GCGCCAGCTCTGCCTTCGGGTCTGCGACGTCACCGGTCTGCACGACGGCTCCAGCCATCCCCACACCCTGCAGGAAGTGG TGGTCGATTCGGGTTCCAGCGAGTGGTATCTGCCTGTTCCCCTGAGTGATCGCGACTACCGCGTGGAACTGGGCTTCCGC CTCAACGACGGCGGTTGGTTCTCTTTGGCCTTCTCGGCTGTAGCCCGGGTTCCGGCCATGCATCCCAGCGAGCAGATCCT GGACCAGTTCGTGCCTTTCTCCCTTGAGGCCACTCCCAGCACCCTGCCCACCCCCGCCGATGCAGGAGACAACAACCTGC ACGAGCGGCTCTACCAAACCGCCACCGTGCGCTGGCGCCGCCTTGGCCGCGGCTCTGAATCGTTCCATGAACTGGACGAG TCCGCCGCTGCAGCGCGTGGCCTCAATGATTCCGGTGTTGGCCGCTGGGCCAGCGGCCGCAGCGAGAGTGGAATCGGTGG TGTCGCTCCACGTCAACGCTCCTTCTGGCTGGTGGCTGACGCCGAACTGATCGTCTACGGCGCCACTGATCCTTCCGCCA CCTTGAGCATTGGCGATGAAGCGGTGCCCCTCTCAGCCGATGGCACCTTCCGTGTTCAGGTTCCCTTCCGCGATGGGCAT CAGCTCTATCCGATCAAAGCGGTGGCTGCCGATGGTGAGCAAACCCGCGACATCACCCTGGAGTTCGAGCGCAAAACCCC CCAGGACAACACCAACACGCCTGAACAAGCCAAAAACGAGTGGTTCTGA
Upstream 100 bases:
>100_bases TCTGGCCTAGCAAGAATCAGGAATTGCTGACGGGTGAAGAGATCTCTGTTGTGACTTTTGCCTAGTGGATGCAGAGTGAT CCCAAACGGAATCTTTAGCG
Downstream 100 bases:
>100_bases GCCCTGTGGCTCTTAAAAAAGCACTGGTCCTCATCCTGCCGTTGGCAGGCTCTCTCTCTCTGCCCATTGCTGTCCCGCTC TTGATGCGAACAGCTGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MNQSLSSLARLTLRQLRRVASDLGVALYSRKSKDELLDAISTKQEFSAGEKRIETAISLAEMEAGFGNTPLPLPETRVVF LPRDPQWAYVFWEIAADSRRSAEAAGARQLCLRVCDVTGLHDGSSHPHTLQEVVVDSGSSEWYLPVPLSDRDYRVELGFR LNDGGWFSLAFSAVARVPAMHPSEQILDQFVPFSLEATPSTLPTPADAGDNNLHERLYQTATVRWRRLGRGSESFHELDE SAAAARGLNDSGVGRWASGRSESGIGGVAPRQRSFWLVADAELIVYGATDPSATLSIGDEAVPLSADGTFRVQVPFRDGH QLYPIKAVAADGEQTRDITLEFERKTPQDNTNTPEQAKNEWF
Sequences:
>Translated_362_residues MNQSLSSLARLTLRQLRRVASDLGVALYSRKSKDELLDAISTKQEFSAGEKRIETAISLAEMEAGFGNTPLPLPETRVVF LPRDPQWAYVFWEIAADSRRSAEAAGARQLCLRVCDVTGLHDGSSHPHTLQEVVVDSGSSEWYLPVPLSDRDYRVELGFR LNDGGWFSLAFSAVARVPAMHPSEQILDQFVPFSLEATPSTLPTPADAGDNNLHERLYQTATVRWRRLGRGSESFHELDE SAAAARGLNDSGVGRWASGRSESGIGGVAPRQRSFWLVADAELIVYGATDPSATLSIGDEAVPLSADGTFRVQVPFRDGH QLYPIKAVAADGEQTRDITLEFERKTPQDNTNTPEQAKNEWF >Mature_362_residues MNQSLSSLARLTLRQLRRVASDLGVALYSRKSKDELLDAISTKQEFSAGEKRIETAISLAEMEAGFGNTPLPLPETRVVF LPRDPQWAYVFWEIAADSRRSAEAAGARQLCLRVCDVTGLHDGSSHPHTLQEVVVDSGSSEWYLPVPLSDRDYRVELGFR LNDGGWFSLAFSAVARVPAMHPSEQILDQFVPFSLEATPSTLPTPADAGDNNLHERLYQTATVRWRRLGRGSESFHELDE SAAAARGLNDSGVGRWASGRSESGIGGVAPRQRSFWLVADAELIVYGATDPSATLSIGDEAVPLSADGTFRVQVPFRDGH QLYPIKAVAADGEQTRDITLEFERKTPQDNTNTPEQAKNEWF
Specific function: Unknown
COG id: COG3330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39844; Mature: 39844
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQSLSSLARLTLRQLRRVASDLGVALYSRKSKDELLDAISTKQEFSAGEKRIETAISLA CCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMEAGFGNTPLPLPETRVVFLPRDPQWAYVFWEIAADSRRSAEAAGARQLCLRVCDVTGL HHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC HDGSSHPHTLQEVVVDSGSSEWYLPVPLSDRDYRVELGFRLNDGGWFSLAFSAVARVPAM CCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCC HPSEQILDQFVPFSLEATPSTLPTPADAGDNNLHERLYQTATVRWRRLGRGSESFHELDE CCHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH SAAAARGLNDSGVGRWASGRSESGIGGVAPRQRSFWLVADAELIVYGATDPSATLSIGDE HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEEECCCCCCEEEECCC AVPLSADGTFRVQVPFRDGHQLYPIKAVAADGEQTRDITLEFERKTPQDNTNTPEQAKNE EEEECCCCEEEEEEECCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHCC WF CC >Mature Secondary Structure MNQSLSSLARLTLRQLRRVASDLGVALYSRKSKDELLDAISTKQEFSAGEKRIETAISLA CCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMEAGFGNTPLPLPETRVVFLPRDPQWAYVFWEIAADSRRSAEAAGARQLCLRVCDVTGL HHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC HDGSSHPHTLQEVVVDSGSSEWYLPVPLSDRDYRVELGFRLNDGGWFSLAFSAVARVPAM CCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCC HPSEQILDQFVPFSLEATPSTLPTPADAGDNNLHERLYQTATVRWRRLGRGSESFHELDE CCHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH SAAAARGLNDSGVGRWASGRSESGIGGVAPRQRSFWLVADAELIVYGATDPSATLSIGDE HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEEECCCCCCEEEECCC AVPLSADGTFRVQVPFRDGHQLYPIKAVAADGEQTRDITLEFERKTPQDNTNTPEQAKNE EEEECCCCEEEEEEECCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHCC WF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA