Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148243120

Identifier: 148243120

GI number: 148243120

Start: 1753777

End: 1754412

Strand: Direct

Name: 148243120

Synonym: SynRCC307_2021

Alternate gene names: NA

Gene position: 1753777-1754412 (Clockwise)

Preceding gene: 148243119

Following gene: 148243121

Centisome position: 78.82

GC content: 64.47

Gene sequence:

>636_bases
ATGACGTCTTCTCCTGTCTCCACCCACGAAGCTGCGCTCACCTTGCTGTTGCGGCAAGGTGAGGCTTCGGCTGCAGAACT
AGCCCAGCAATTGGGGGTGTCTGTTCAGGTGATGCGCCGCCACCTGCGCAGCCTCGAGCGCGACGAGCTGGTGGAAGCCA
GCCCACAATCCGGCGGTCCCGGCCGGCCGAGCAATCGCTGGCGCCTGACAGCCAACGGCCGTGGACGCTTTCCCGATGGC
AGTGAGCATTTCGCCCTTGGCCTGCTGCAGTCGCTGAGCACAGCCTTGCCCCCAGAGCAAGTCAAAGACCTGCTCAGCAC
CCAAGCGGATTGCCAAGCCGGGCGCTACCGCGAGCAACTCGGCGATGAGCCCCTCTCCGGCCGACTGGAAAAACTGGTGG
AGCTCAGGCGGCGCGAGGGCTATGTGGCCGACTGCCGCCAGGATCCCGACAGTTCTGCATGGCTGCTGCAGGAGTATCAC
TGCTCGGTCTCACGGGTGGCCGAAGCCTTCCCCTTGATCTGCGATCAAGAGCTGCAGGTGATGCGGCGCACCTTCCCCGA
TTGCAGCGTTGAGCGGGTGCACTGGAAGCTCGATGGCGATCACACCTGTGGTTTCCGGCTCACCCCCCGTGGCTGA

Upstream 100 bases:

>100_bases
CCAGAAGCCGCGCCAAGAAGGAGCCGCTCTGATCCAACGGGTTCAAGACGTCTATCTTGACCCAGCGATCCCCATCGCCT
GATGCCAGGCTGGGAAGACG

Downstream 100 bases:

>100_bases
GAGCCCACTGAGCCACGACGAAGCCGCAGCCATTGATGCCCTGCCCTGGCCGCTGCTGGAGCGCCAGCGACTACGGCTGC
TGGCTCACAGCCTGCGCAGC

Product: transcriptional regulator

Products: NA

Alternate protein names: ArsR Family Transcriptional Regulator; Transcriptional Regulatory Protein; Regulatory Protein ArsR; HTH Domain Family; DeoR Family Transcriptional Regulator; Sugar-Specific Transcriptional Regulator TrmB; HTH Domain Family Protein; Transcriptional Regulator TrmB; Regulatory Proteins AsnC Family Protein; Transcriptional Regulator DeoR Family; Transcriptional Regulator Protein; Transcriptional Regulator ArsR Family; Iron-Sulfur Cluster Biosynthesis Transcriptional Regulator

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MTSSPVSTHEAALTLLLRQGEASAAELAQQLGVSVQVMRRHLRSLERDELVEASPQSGGPGRPSNRWRLTANGRGRFPDG
SEHFALGLLQSLSTALPPEQVKDLLSTQADCQAGRYREQLGDEPLSGRLEKLVELRRREGYVADCRQDPDSSAWLLQEYH
CSVSRVAEAFPLICDQELQVMRRTFPDCSVERVHWKLDGDHTCGFRLTPRG

Sequences:

>Translated_211_residues
MTSSPVSTHEAALTLLLRQGEASAAELAQQLGVSVQVMRRHLRSLERDELVEASPQSGGPGRPSNRWRLTANGRGRFPDG
SEHFALGLLQSLSTALPPEQVKDLLSTQADCQAGRYREQLGDEPLSGRLEKLVELRRREGYVADCRQDPDSSAWLLQEYH
CSVSRVAEAFPLICDQELQVMRRTFPDCSVERVHWKLDGDHTCGFRLTPRG
>Mature_210_residues
TSSPVSTHEAALTLLLRQGEASAAELAQQLGVSVQVMRRHLRSLERDELVEASPQSGGPGRPSNRWRLTANGRGRFPDGS
EHFALGLLQSLSTALPPEQVKDLLSTQADCQAGRYREQLGDEPLSGRLEKLVELRRREGYVADCRQDPDSSAWLLQEYHC
SVSRVAEAFPLICDQELQVMRRTFPDCSVERVHWKLDGDHTCGFRLTPRG

Specific function: Unknown

COG id: COG2345

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23563; Mature: 23432

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSPVSTHEAALTLLLRQGEASAAELAQQLGVSVQVMRRHLRSLERDELVEASPQSGGP
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHCCCCCCCC
GRPSNRWRLTANGRGRFPDGSEHFALGLLQSLSTALPPEQVKDLLSTQADCQAGRYREQL
CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
GDEPLSGRLEKLVELRRREGYVADCRQDPDSSAWLLQEYHCSVSRVAEAFPLICDQELQV
CCCCCHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHH
MRRTFPDCSVERVHWKLDGDHTCGFRLTPRG
HHHHCCCCCEEEEEEEECCCCCCCEEECCCC
>Mature Secondary Structure 
TSSPVSTHEAALTLLLRQGEASAAELAQQLGVSVQVMRRHLRSLERDELVEASPQSGGP
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHCCCCCCCC
GRPSNRWRLTANGRGRFPDGSEHFALGLLQSLSTALPPEQVKDLLSTQADCQAGRYREQL
CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
GDEPLSGRLEKLVELRRREGYVADCRQDPDSSAWLLQEYHCSVSRVAEAFPLICDQELQV
CCCCCHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHH
MRRTFPDCSVERVHWKLDGDHTCGFRLTPRG
HHHHCCCCCEEEEEEEECCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA