| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is yedP [C]
Identifier: 148243102
GI number: 148243102
Start: 1736087
End: 1736860
Strand: Direct
Name: yedP [C]
Synonym: SynRCC307_2003
Alternate gene names: 148243102
Gene position: 1736087-1736860 (Clockwise)
Preceding gene: 148243101
Following gene: 148243112
Centisome position: 78.03
GC content: 59.56
Gene sequence:
>774_bases ATGACGCGCTGGGTGGTGACCGATCTCGACGGCACGTTGCTTGATCACAGCTACAGCTGGGAGCCGGCTCGCAGCACCAT TTCCGCACTGAAGCAACAAGGGATTTTGGTGATCCCCTGCACCAGCAAAACCGCTGAAGAGGTCAGAGCGTTTCGCCAAG ACGCTGGTCTTAGAGATCCATTCATCGTCGAAAACGGCGGAGCCATCTATGGCAACAACGCCGATGGCAGCGAATGGGTG GTGCCTTTAGGAGCAGCACACAGCGTTTTGAGGCCGCAATTGGATGAACTCAGTCAAGCGTTAGGCCATGAACTCGTGGC CCTGGAAGATCTCAGCGCAGAGCAGGGCGAGGCATTGACGGGATTGCGCGGTCAAGCGCTGGCCTCCGCCCAGCGCCGCG AGTGGAGTGTTCCGTTTCTCACATCCCCTGAAGATCTGCGAGAGCCGCTGCGGCAGCTGGCAGCCCAGCATCAGCTGCTG GTGGTGCAAGGCAACCGCATGAGCCATTTGCTCAGCGGCGGCAGCCATAAGGGCCGCGCGGTGGAGGTGCTCAAACAGCA TCTGCAGCAACCCGATGTTGCAGTGCTTGGGCTTGGAGACTCTCCTAATGATCTGCCGATGCTGGAAGCCGTGGATCAAG CCGTTGTGGTGCCAGGCGCCCAAGGGCCACATCCGGTGTTCCAAGACGCCATCGCCAGTGGCCGCTTTCAATTAGCGCAA GCCCCACACGGCGAAGGTTGGGCAATCGCTGTGAACCAATGGCTTAACAGCTGA
Upstream 100 bases:
>100_bases CGGCCAAGCTCAGCTGGTCTGACGCGCTCAGTGGCTCCACGATCGGTGGCCCTTATCTCGAGTTGGAGCCGTTTGCCGTG CATTGGCTGGAGCTGGGTTG
Downstream 100 bases:
>100_bases TCTGATAAGTCCTAACAACGAGTAAGAAGATCACCAGAGCTTTGCTGCTTGTCAATCAATTGAGCAAACGCTTGCTGGCA AGTCCAGCGAAGTGGAACCC
Product: mannosyl-3-phosphoglycerate phosphatase
Products: NA
Alternate protein names: MPGP [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTRWVVTDLDGTLLDHSYSWEPARSTISALKQQGILVIPCTSKTAEEVRAFRQDAGLRDPFIVENGGAIYGNNADGSEWV VPLGAAHSVLRPQLDELSQALGHELVALEDLSAEQGEALTGLRGQALASAQRREWSVPFLTSPEDLREPLRQLAAQHQLL VVQGNRMSHLLSGGSHKGRAVEVLKQHLQQPDVAVLGLGDSPNDLPMLEAVDQAVVVPGAQGPHPVFQDAIASGRFQLAQ APHGEGWAIAVNQWLNS
Sequences:
>Translated_257_residues MTRWVVTDLDGTLLDHSYSWEPARSTISALKQQGILVIPCTSKTAEEVRAFRQDAGLRDPFIVENGGAIYGNNADGSEWV VPLGAAHSVLRPQLDELSQALGHELVALEDLSAEQGEALTGLRGQALASAQRREWSVPFLTSPEDLREPLRQLAAQHQLL VVQGNRMSHLLSGGSHKGRAVEVLKQHLQQPDVAVLGLGDSPNDLPMLEAVDQAVVVPGAQGPHPVFQDAIASGRFQLAQ APHGEGWAIAVNQWLNS >Mature_256_residues TRWVVTDLDGTLLDHSYSWEPARSTISALKQQGILVIPCTSKTAEEVRAFRQDAGLRDPFIVENGGAIYGNNADGSEWVV PLGAAHSVLRPQLDELSQALGHELVALEDLSAEQGEALTGLRGQALASAQRREWSVPFLTSPEDLREPLRQLAAQHQLLV VQGNRMSHLLSGGSHKGRAVEVLKQHLQQPDVAVLGLGDSPNDLPMLEAVDQAVVVPGAQGPHPVFQDAIASGRFQLAQA PHGEGWAIAVNQWLNS
Specific function: Unknown
COG id: COG3769
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. MPGP family [H]
Homologues:
Organism=Escherichia coli, GI1788265, Length=267, Percent_Identity=31.8352059925094, Blast_Score=99, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR013200 - InterPro: IPR006379 - InterPro: IPR006381 - InterPro: IPR012815 [H]
Pfam domain/function: PF08282 Hydrolase_3 [H]
EC number: =3.1.3.70 [H]
Molecular weight: Translated: 27708; Mature: 27577
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRWVVTDLDGTLLDHSYSWEPARSTISALKQQGILVIPCTSKTAEEVRAFRQDAGLRDP CCCEEEECCCCEEECCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCC FIVENGGAIYGNNADGSEWVVPLGAAHSVLRPQLDELSQALGHELVALEDLSAEQGEALT EEEECCCEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCHHH GLRGQALASAQRREWSVPFLTSPEDLREPLRQLAAQHQLLVVQGNRMSHLLSGGSHKGRA CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCHH VEVLKQHLQQPDVAVLGLGDSPNDLPMLEAVDQAVVVPGAQGPHPVFQDAIASGRFQLAQ HHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCEEEECCCCCCCHHHHHHHHCCCEEEEC APHGEGWAIAVNQWLNS CCCCCCEEEEHHHHHCC >Mature Secondary Structure TRWVVTDLDGTLLDHSYSWEPARSTISALKQQGILVIPCTSKTAEEVRAFRQDAGLRDP CCEEEECCCCEEECCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCC FIVENGGAIYGNNADGSEWVVPLGAAHSVLRPQLDELSQALGHELVALEDLSAEQGEALT EEEECCCEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCHHH GLRGQALASAQRREWSVPFLTSPEDLREPLRQLAAQHQLLVVQGNRMSHLLSGGSHKGRA CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCHH VEVLKQHLQQPDVAVLGLGDSPNDLPMLEAVDQAVVVPGAQGPHPVFQDAIASGRFQLAQ HHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCEEEECCCCCCCHHHHHHHHCCCEEEEC APHGEGWAIAVNQWLNS CCCCCCEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA