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The map label for this gene is crtW [H]

Identifier: 148243092

GI number: 148243092

Start: 1729342

End: 1730103

Strand: Direct

Name: crtW [H]

Synonym: SynRCC307_1993

Alternate gene names: 148243092

Gene position: 1729342-1730103 (Clockwise)

Preceding gene: 148243091

Following gene: 148243093

Centisome position: 77.73

GC content: 44.23

Gene sequence:

>762_bases
GTGCAAAATGATTTAAAAGCCAACAGCTTCTACGGATTAGCAATCACCCTTATTGTAGGGTTTTTATGGCTGACAACATT
CGTTTCTGTTGTTAATCTGCCATCAGAAAGTTCCTATTGGTTTGTTGGCTTTGTACTCCTCCTTCTTCGTGTTTTTGCGT
ATACCGGTTTATTCATAATCGCGCATGATTCAATGCACCAGAGTCTCGCACCCTCCTTCCCTGAGTTAAATCATCAGATC
GGCAGGCTCGCCTTGGCCCTTTATGCAGGTCTTTTATTTGATATCTGCGAGTTAAATCACATCAGTCACCACAATGATCC
TGAATCTGAACACGATCCTGATTATTGCGTAAAGACACCTGACAATCCCGTCTCGTGGTACTGCAGCTTTATGCTTAATT
ACCTAAGCGCGAGCCAAATCTTTCGGCTTTCACTTGTATTCCTTATCTGTTATGCCACATTGCAAGTTTTCAGCGAAGAT
GCGCTGTTCAAGCTGATTCTATTTTGCATCATTCCTCTCTTTCTTAGTTCGATCCAGCTATTTCTATTTGGAACATGGCT
TCCCCATCGCAAATCCAAATCCAGATCTGCGGATGAAACGCCGAGAAGCCTTGCTCTACATCCGTTGATTTCACTCGCAG
CTTGTTATCATTTTGGTTACCATAAAGAGCATCACTCTTTCCCTCATATCCCCTGGTTCAGGCTTCCTCTGCTGCGGCAG
CAGTGCCTGAAATCAACAGCTGTGCGGGACTCCTGCAACTAA

Upstream 100 bases:

>100_bases
GGCATGAACGTTGCATGGAGATTTCTCCTAGATGAGAACAACAAAATTTATTTTGTTGCCATTGACCTTCTTGCATCACC
CGCTGAATTGTTGAAGCTTG

Downstream 100 bases:

>100_bases
CTAACCGGTCAATTTAAAATGAGCGCCAACGAGTGGACAGAGCAAGAAAAAACTATTGCTGAACAAGCCTTCGAATCAGG
CAACAAGAAAGCAATGGAGG

Product: beta-carotene ketolase

Products: NA

Alternate protein names: Beta-carotene oxygenase [H]

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MQNDLKANSFYGLAITLIVGFLWLTTFVSVVNLPSESSYWFVGFVLLLLRVFAYTGLFIIAHDSMHQSLAPSFPELNHQI
GRLALALYAGLLFDICELNHISHHNDPESEHDPDYCVKTPDNPVSWYCSFMLNYLSASQIFRLSLVFLICYATLQVFSED
ALFKLILFCIIPLFLSSIQLFLFGTWLPHRKSKSRSADETPRSLALHPLISLAACYHFGYHKEHHSFPHIPWFRLPLLRQ
QCLKSTAVRDSCN

Sequences:

>Translated_253_residues
MQNDLKANSFYGLAITLIVGFLWLTTFVSVVNLPSESSYWFVGFVLLLLRVFAYTGLFIIAHDSMHQSLAPSFPELNHQI
GRLALALYAGLLFDICELNHISHHNDPESEHDPDYCVKTPDNPVSWYCSFMLNYLSASQIFRLSLVFLICYATLQVFSED
ALFKLILFCIIPLFLSSIQLFLFGTWLPHRKSKSRSADETPRSLALHPLISLAACYHFGYHKEHHSFPHIPWFRLPLLRQ
QCLKSTAVRDSCN
>Mature_253_residues
MQNDLKANSFYGLAITLIVGFLWLTTFVSVVNLPSESSYWFVGFVLLLLRVFAYTGLFIIAHDSMHQSLAPSFPELNHQI
GRLALALYAGLLFDICELNHISHHNDPESEHDPDYCVKTPDNPVSWYCSFMLNYLSASQIFRLSLVFLICYATLQVFSED
ALFKLILFCIIPLFLSSIQLFLFGTWLPHRKSKSRSADETPRSLALHPLISLAACYHFGYHKEHHSFPHIPWFRLPLLRQ
QCLKSTAVRDSCN

Specific function: Converts beta-carotene to canthaxanthin via echinenone [H]

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 29003; Mature: 29003

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNDLKANSFYGLAITLIVGFLWLTTFVSVVNLPSESSYWFVGFVLLLLRVFAYTGLFII
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEE
AHDSMHQSLAPSFPELNHQIGRLALALYAGLLFDICELNHISHHNDPESEHDPDYCVKTP
EECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCC
DNPVSWYCSFMLNYLSASQIFRLSLVFLICYATLQVFSEDALFKLILFCIIPLFLSSIQL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLFGTWLPHRKSKSRSADETPRSLALHPLISLAACYHFGYHKEHHSFPHIPWFRLPLLRQ
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
QCLKSTAVRDSCN
HHHHHHHHHCCCC
>Mature Secondary Structure
MQNDLKANSFYGLAITLIVGFLWLTTFVSVVNLPSESSYWFVGFVLLLLRVFAYTGLFII
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEE
AHDSMHQSLAPSFPELNHQIGRLALALYAGLLFDICELNHISHHNDPESEHDPDYCVKTP
EECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCC
DNPVSWYCSFMLNYLSASQIFRLSLVFLICYATLQVFSEDALFKLILFCIIPLFLSSIQL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLFGTWLPHRKSKSRSADETPRSLALHPLISLAACYHFGYHKEHHSFPHIPWFRLPLLRQ
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
QCLKSTAVRDSCN
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592436 [H]