| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148243079
Identifier: 148243079
GI number: 148243079
Start: 1722060
End: 1722380
Strand: Direct
Name: 148243079
Synonym: SynRCC307_1980
Alternate gene names: NA
Gene position: 1722060-1722380 (Clockwise)
Preceding gene: 148243078
Following gene: 148243082
Centisome position: 77.4
GC content: 56.39
Gene sequence:
>321_bases TTGAGCAGACAGTCAAAACGAGCAGCGCCAGCTAAAAACAGTACAGAACTACTATCCTTAGTGATGCCAGACAAAGCCTG GGACCAAGGCTTCCTCATTCCTGAGCTACCAGCCGAACAACCATGGAAGCGCTGCCTTTACTGCGCAGGCTTTGAGCTCT GGCAAGGAACGCTAGCCAGCTGTCAAACCAGAAAAATGGTGCTGGCGCCGAAGGCCCATTACAACCGCCGCTGCAACAGC TGGGCACCGAATGCCTACTGCAAAGCGAGGCCCGACTGGAGCGCCGAACCGGCCGCCACGATCATTGCTGGCAACCACTG A
Upstream 100 bases:
>100_bases CAACGCGCCTCAGGCGCTGGCTGGACACTCGCTTGAGGACCTTGGCGGCAGACCAGAGAATTCAAGATGCCAGGGCTCTG CGCAATGAATTTGTGCTCGA
Downstream 100 bases:
>100_bases GAGGGACAAAAGCAAACAAAACAAAGCCCCCGCCTAGGCGGGGGCAAAGCGCGGCGTGAAGGCCATTGGCTCAGTCGCGC TGCTTTTTGAAAGCTGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSRQSKRAAPAKNSTELLSLVMPDKAWDQGFLIPELPAEQPWKRCLYCAGFELWQGTLASCQTRKMVLAPKAHYNRRCNS WAPNAYCKARPDWSAEPAATIIAGNH
Sequences:
>Translated_106_residues MSRQSKRAAPAKNSTELLSLVMPDKAWDQGFLIPELPAEQPWKRCLYCAGFELWQGTLASCQTRKMVLAPKAHYNRRCNS WAPNAYCKARPDWSAEPAATIIAGNH >Mature_105_residues SRQSKRAAPAKNSTELLSLVMPDKAWDQGFLIPELPAEQPWKRCLYCAGFELWQGTLASCQTRKMVLAPKAHYNRRCNSW APNAYCKARPDWSAEPAATIIAGNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11919; Mature: 11788
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQSKRAAPAKNSTELLSLVMPDKAWDQGFLIPELPAEQPWKRCLYCAGFELWQGTLAS CCCCCCCCCCCCCCHHEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHC CQTRKMVLAPKAHYNRRCNSWAPNAYCKARPDWSAEPAATIIAGNH CCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCC >Mature Secondary Structure SRQSKRAAPAKNSTELLSLVMPDKAWDQGFLIPELPAEQPWKRCLYCAGFELWQGTLAS CCCCCCCCCCCCCHHEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHC CQTRKMVLAPKAHYNRRCNSWAPNAYCKARPDWSAEPAATIIAGNH CCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA