| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is hisD [H]
Identifier: 148243061
GI number: 148243061
Start: 1706458
End: 1707768
Strand: Direct
Name: hisD [H]
Synonym: SynRCC307_1962
Alternate gene names: 148243061
Gene position: 1706458-1707768 (Clockwise)
Preceding gene: 148243045
Following gene: 148243065
Centisome position: 76.7
GC content: 63.62
Gene sequence:
>1311_bases GTGATTGTCTCGACAGACGCGATGATGCAGCTGCTCAACGACCCTGTCGCGGCCGTTGATCGTCTGCGGCAAATCGAAGC GAGAACCCACTCCAGTGGCGTCGCTACAGCGCAAGCCACCGTGGATTCCGTTCTTGCGGCTGTCAAAGAGCGCGGCGATG CAGCCCTCAAGGAGTACACCGAGCGTTTTGACGGGGTTGTGCTCGACTGCCTGCGGGTGGATCCAGCCGCGACTAAGGCG GCCTGGCAGAGCGCTCCCCTGGCTTTGCGCGATGCCCTGCAACTGGCCCATCGGCGCATCAGCGCTTTTCACCGCGAACA ATTACCGCAGGACATCGAGCTCAAAGGTCCCCATGGGGAACGCCTTGGCAGGCGTTGGCGCCCGGTCAACTCCGCTGGGC TCTATGTGCCTGGTGGCCGCGCGGCTTACCCCAGCACGGTGTTGATGAATGCCATCCCCGCCCAAGTCGCGGGGGTGAAG CAAGTGGTGATGGTCACCCCGCCAGGGCCAGACGGGCAAGTCAACCCCGCCGTGTTGGCGGCCGCCCACGTGGCTGGCGT CGATCAGATCTACAGCGTCGGCGGCGCTCAAGCCGTGGCGGCGCTGGCCTTCGGCACCGAGTCGATCCCCGCGGTGGACG TGATCACCGGACCTGGAAATTTGTTTGTGACCCTGGCCAAAAAAAGCGTGTATGGCCGGGTTGGCATTGATTCGCTGGCT GGGCCCAGCGAAGTGTTGGTGATCGCCGATGACAGCGCCTCAGCCGAGCTGGTGGCGGCGGATTTGCTGGCCCAAGCAGA GCACGACCCCCTGGCTGCAGCGATTCTGCTGACCACCAGCCCGCGCCTCGTGCAAGAGGTGCCCGAGGCGATTGCAGCGC AACTGGAGGATCACCCCAGGCGCGAGGTAACGGAAGCCTCGATCCGCGATTGGGGCTTAATAGTGCTCTGCGAATCACTC GAGCAAGCCGCGCAGCTCTCCGATCGCTTTGCTCCTGAACATCTGGAGTTGTTGGTGCAGGAACCAGCCGCGCTGGCTGA ACGCATTCAGCAGGCCGGCGCGATCTTCATGGGACAGCACACCCCAGAAGCAGCTGGCGACTACCTTGCTGGGCCCAATC ACACCCTGCCGACCTCCGGGACAGCCCGCTTTGCTGGCGCCTTGAGCGTCGAAACGTTCATGCGCCACACCAGCCTGATC AACTTCAACCGGCAAGCGCTTGAAGCCACGGGCGCAGCGATCATGGAGTTAGCAGCCCATGAGGGATTGCATAGTCACCG CGAGTCGGTGCGCCGCAGGCTGCAGAGCTGA
Upstream 100 bases:
>100_bases TTACGAGCAGACTTGTTATTCGCCACAGAAGTTTCGGGGCCGCAGATCGACAAACAAAGATCCTAACTCCACAGCCTTCC CTAGAGGTGGCTTAGCGTCA
Downstream 100 bases:
>100_bases CTTACGGGGTCACGAGCCAATGGGCGGGCTCTTGGCCAGGGATCATCTGCAACACCAGATCGCCTGGGCGGGGCTCACCC ACTCGTCTGCCAGCAATCCA
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MIVSTDAMMQLLNDPVAAVDRLRQIEARTHSSGVATAQATVDSVLAAVKERGDAALKEYTERFDGVVLDCLRVDPAATKA AWQSAPLALRDALQLAHRRISAFHREQLPQDIELKGPHGERLGRRWRPVNSAGLYVPGGRAAYPSTVLMNAIPAQVAGVK QVVMVTPPGPDGQVNPAVLAAAHVAGVDQIYSVGGAQAVAALAFGTESIPAVDVITGPGNLFVTLAKKSVYGRVGIDSLA GPSEVLVIADDSASAELVAADLLAQAEHDPLAAAILLTTSPRLVQEVPEAIAAQLEDHPRREVTEASIRDWGLIVLCESL EQAAQLSDRFAPEHLELLVQEPAALAERIQQAGAIFMGQHTPEAAGDYLAGPNHTLPTSGTARFAGALSVETFMRHTSLI NFNRQALEATGAAIMELAAHEGLHSHRESVRRRLQS
Sequences:
>Translated_436_residues MIVSTDAMMQLLNDPVAAVDRLRQIEARTHSSGVATAQATVDSVLAAVKERGDAALKEYTERFDGVVLDCLRVDPAATKA AWQSAPLALRDALQLAHRRISAFHREQLPQDIELKGPHGERLGRRWRPVNSAGLYVPGGRAAYPSTVLMNAIPAQVAGVK QVVMVTPPGPDGQVNPAVLAAAHVAGVDQIYSVGGAQAVAALAFGTESIPAVDVITGPGNLFVTLAKKSVYGRVGIDSLA GPSEVLVIADDSASAELVAADLLAQAEHDPLAAAILLTTSPRLVQEVPEAIAAQLEDHPRREVTEASIRDWGLIVLCESL EQAAQLSDRFAPEHLELLVQEPAALAERIQQAGAIFMGQHTPEAAGDYLAGPNHTLPTSGTARFAGALSVETFMRHTSLI NFNRQALEATGAAIMELAAHEGLHSHRESVRRRLQS >Mature_436_residues MIVSTDAMMQLLNDPVAAVDRLRQIEARTHSSGVATAQATVDSVLAAVKERGDAALKEYTERFDGVVLDCLRVDPAATKA AWQSAPLALRDALQLAHRRISAFHREQLPQDIELKGPHGERLGRRWRPVNSAGLYVPGGRAAYPSTVLMNAIPAQVAGVK QVVMVTPPGPDGQVNPAVLAAAHVAGVDQIYSVGGAQAVAALAFGTESIPAVDVITGPGNLFVTLAKKSVYGRVGIDSLA GPSEVLVIADDSASAELVAADLLAQAEHDPLAAAILLTTSPRLVQEVPEAIAAQLEDHPRREVTEASIRDWGLIVLCESL EQAAQLSDRFAPEHLELLVQEPAALAERIQQAGAIFMGQHTPEAAGDYLAGPNHTLPTSGTARFAGALSVETFMRHTSLI NFNRQALEATGAAIMELAAHEGLHSHRESVRRRLQS
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=417, Percent_Identity=40.5275779376499, Blast_Score=295, Evalue=6e-81, Organism=Saccharomyces cerevisiae, GI6319819, Length=402, Percent_Identity=41.044776119403, Blast_Score=296, Evalue=4e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46227; Mature: 46227
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVSTDAMMQLLNDPVAAVDRLRQIEARTHSSGVATAQATVDSVLAAVKERGDAALKEYT CEECHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHH ERFDGVVLDCLRVDPAATKAAWQSAPLALRDALQLAHRRISAFHREQLPQDIELKGPHGE HHHCCHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHH RLGRRWRPVNSAGLYVPGGRAAYPSTVLMNAIPAQVAGVKQVVMVTPPGPDGQVNPAVLA HHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHH AAHVAGVDQIYSVGGAQAVAALAFGTESIPAVDVITGPGNLFVTLAKKSVYGRVGIDSLA HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECHHHCCCCCCCCCC GPSEVLVIADDSASAELVAADLLAQAEHDPLAAAILLTTSPRLVQEVPEAIAAQLEDHPR CCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCH REVTEASIRDWGLIVLCESLEQAAQLSDRFAPEHLELLVQEPAALAERIQQAGAIFMGQH HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHCCCEEECCC TPEAAGDYLAGPNHTLPTSGTARFAGALSVETFMRHTSLINFNRQALEATGAAIMELAAH CCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH EGLHSHRESVRRRLQS CCHHHHHHHHHHHHCC >Mature Secondary Structure MIVSTDAMMQLLNDPVAAVDRLRQIEARTHSSGVATAQATVDSVLAAVKERGDAALKEYT CEECHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHH ERFDGVVLDCLRVDPAATKAAWQSAPLALRDALQLAHRRISAFHREQLPQDIELKGPHGE HHHCCHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHH RLGRRWRPVNSAGLYVPGGRAAYPSTVLMNAIPAQVAGVKQVVMVTPPGPDGQVNPAVLA HHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHH AAHVAGVDQIYSVGGAQAVAALAFGTESIPAVDVITGPGNLFVTLAKKSVYGRVGIDSLA HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECHHHCCCCCCCCCC GPSEVLVIADDSASAELVAADLLAQAEHDPLAAAILLTTSPRLVQEVPEAIAAQLEDHPR CCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCH REVTEASIRDWGLIVLCESLEQAAQLSDRFAPEHLELLVQEPAALAERIQQAGAIFMGQH HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHCCCEEECCC TPEAAGDYLAGPNHTLPTSGTARFAGALSVETFMRHTSLINFNRQALEATGAAIMELAAH CCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH EGLHSHRESVRRRLQS CCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12917641 [H]