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The map label for this gene is gidB

Identifier: 148243045

GI number: 148243045

Start: 1688697

End: 1689410

Strand: Direct

Name: gidB

Synonym: SynRCC307_1946

Alternate gene names: 148243045

Gene position: 1688697-1689410 (Clockwise)

Preceding gene: 148243040

Following gene: 148243061

Centisome position: 75.9

GC content: 64.01

Gene sequence:

>714_bases
CTGAGTTCAACCGCACCCTGGGACCAACTGACCTGGCAGCCCTCCAGCGATCAGCTCCAGCAGTTCAACCGGCTGCAAGA
GCTGCTCCGCGAGTGGAACGGCAAGGTCAACCTCACCCGATTGGTGGAGGGAGAGGACTATTGGATTAGCCAGATTTTTG
ACAGCCTCTGGCCGCTGCAGCCCTGGCTGAGCAAGGGCGAGCCGCTCAAGGTGATCGATGTGGGCACCGGTGGCGGCTTC
CCAGGACTGGCGATCGCCATTGCCTTGCCGCAAGCGCAGCTCACCCTGGTGGATTCGGTGGGCCGCAAAGTGCAAGCTGT
GCAAGCCATGGCCGATGCGTTGGGCCTCACTGAGCGCGTGCAACTGCGCTGTGAACGGGCAGAGAAGACAGGGCGAGACC
CCCACTGCCGCCGCCAATTCCAACTGGCCGTCGCCCGCGCTGTCGCTGCGGCCCCGGTTGTCGCCGAATACTTGGTGCCG
CTGCTGAGCGCTGATGGCACCGCCCTTCTGTACCGGGGCCAGTGGAGCGATGAGGATCAACGCCAATTGCAACGGGCTGC
TGCCCAGCTGAACAGCAGCACCGAAACGATCCAAGTTCAAGAGCTACCCGCAGAGCGGGGCCTGCGCCATGTGATCCCGC
TGCGGCCTCAAGGGGTTTGCCCAAAGCAGTACCCCCGGGCTGTTGGTGTGCCCGCCAAGCTGCCGTTGGCTTGA

Upstream 100 bases:

>100_bases
CTGGGGAACCTCCAACAGGGCATAGAGGCTGGCGGGAGCAGGGGCCAAAGCTGCGGCTGCAGACGCGGCTTGCGATCCTA
GTGATGTTGCGCCGTCTGCA

Downstream 100 bases:

>100_bases
GCTAGGGGCCCAGGCGCTTGACGGTTTTTTGACCCAGGCGCGCCTTCATTTGCCGCAAAATCCCAGGAATCTGCTGCCGC
CACGGGCTGGCGCTAAGCAC

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MSSTAPWDQLTWQPSSDQLQQFNRLQELLREWNGKVNLTRLVEGEDYWISQIFDSLWPLQPWLSKGEPLKVIDVGTGGGF
PGLAIAIALPQAQLTLVDSVGRKVQAVQAMADALGLTERVQLRCERAEKTGRDPHCRRQFQLAVARAVAAAPVVAEYLVP
LLSADGTALLYRGQWSDEDQRQLQRAAAQLNSSTETIQVQELPAERGLRHVIPLRPQGVCPKQYPRAVGVPAKLPLA

Sequences:

>Translated_237_residues
MSSTAPWDQLTWQPSSDQLQQFNRLQELLREWNGKVNLTRLVEGEDYWISQIFDSLWPLQPWLSKGEPLKVIDVGTGGGF
PGLAIAIALPQAQLTLVDSVGRKVQAVQAMADALGLTERVQLRCERAEKTGRDPHCRRQFQLAVARAVAAAPVVAEYLVP
LLSADGTALLYRGQWSDEDQRQLQRAAAQLNSSTETIQVQELPAERGLRHVIPLRPQGVCPKQYPRAVGVPAKLPLA
>Mature_236_residues
SSTAPWDQLTWQPSSDQLQQFNRLQELLREWNGKVNLTRLVEGEDYWISQIFDSLWPLQPWLSKGEPLKVIDVGTGGGFP
GLAIAIALPQAQLTLVDSVGRKVQAVQAMADALGLTERVQLRCERAEKTGRDPHCRRQFQLAVARAVAAAPVVAEYLVPL
LSADGTALLYRGQWSDEDQRQLQRAAAQLNSSTETIQVQELPAERGLRHVIPLRPQGVCPKQYPRAVGVPAKLPLA

Specific function: Specifically methylates the N7 position of a guanosine in 16S rRNA

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family

Homologues:

Organism=Escherichia coli, GI1790179, Length=205, Percent_Identity=27.8048780487805, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMG_SYNR3 (A5GVE0)

Other databases:

- EMBL:   CT978603
- RefSeq:   YP_001228202.1
- ProteinModelPortal:   A5GVE0
- STRING:   A5GVE0
- GeneID:   5157483
- GenomeReviews:   CT978603_GR
- KEGG:   syr:SynRCC307_1946
- eggNOG:   COG0357
- HOGENOM:   HBG686577
- OMA:   AITHPNS
- ProtClustDB:   PRK00107
- GO:   GO:0005737
- HAMAP:   MF_00074
- InterPro:   IPR003682
- PIRSF:   PIRSF003078
- TIGRFAMs:   TIGR00138

Pfam domain/function: PF02527 GidB

EC number: 2.1.-.-

Molecular weight: Translated: 26245; Mature: 26114

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTAPWDQLTWQPSSDQLQQFNRLQELLREWNGKVNLTRLVEGEDYWISQIFDSLWPLQ
CCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCC
PWLSKGEPLKVIDVGTGGGFPGLAIAIALPQAQLTLVDSVGRKVQAVQAMADALGLTERV
HHHCCCCCEEEEEECCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
QLRCERAEKTGRDPHCRRQFQLAVARAVAAAPVVAEYLVPLLSADGTALLYRGQWSDEDQ
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH
RQLQRAAAQLNSSTETIQVQELPAERGLRHVIPLRPQGVCPKQYPRAVGVPAKLPLA
HHHHHHHHHHCCCCCEEEEEECCHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSTAPWDQLTWQPSSDQLQQFNRLQELLREWNGKVNLTRLVEGEDYWISQIFDSLWPLQ
CCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCC
PWLSKGEPLKVIDVGTGGGFPGLAIAIALPQAQLTLVDSVGRKVQAVQAMADALGLTERV
HHHCCCCCEEEEEECCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
QLRCERAEKTGRDPHCRRQFQLAVARAVAAAPVVAEYLVPLLSADGTALLYRGQWSDEDQ
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH
RQLQRAAAQLNSSTETIQVQELPAERGLRHVIPLRPQGVCPKQYPRAVGVPAKLPLA
HHHHHHHHHHCCCCCEEEEEECCHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA