| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is 148243017
Identifier: 148243017
GI number: 148243017
Start: 1661659
End: 1661997
Strand: Direct
Name: 148243017
Synonym: SynRCC307_1918
Alternate gene names: NA
Gene position: 1661659-1661997 (Clockwise)
Preceding gene: 148243016
Following gene: 148243018
Centisome position: 74.68
GC content: 45.13
Gene sequence:
>339_bases GTGGATCAAGCCCTGGCGGAAGGGGCAAGTGCTACAGCAGAGGGCTTTAATGATGATGTCTCCACTACTTTTAAGATCAA GGAAGTCACTCAGATTGTCAACGAGATAAAAGATGGAGACCCTAAAAAGCTGAGTCAAAGCATTGATAAAATCGCTGATA ACTTCACAGCAAATGCTTGGTCTACAGGCAAGAGATTCCTAGATAGCACTAAGCTAACCAATCTTCAGAAGACGCAAGAA GATGCGGTCAAGAGCTTTCAGAAAGGCGACATCGCAGGAGGGATTGAAAAGACTTTAAACCTCAATCCCCCTCAACAACG GGGTGACGAAGACCATTGA
Upstream 100 bases:
>100_bases TCACACAGTTACAGCCCCTTTAAGGGTTATTGCAGCAGCACCAGTTGCCGCCCAACGATTTATTGGCAATGGAGTAACAG CATTGGCGGCGGGGAAGCCA
Downstream 100 bases:
>100_bases AAATCCCGAGCAGATTCAAGCCCCATCTGGTGAATCTGTCGCAAAAGTCGCCCTGCTCCCACTGGACTACAAAACAAAAG GATTTGCCTCGAAGATACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MDQALAEGASATAEGFNDDVSTTFKIKEVTQIVNEIKDGDPKKLSQSIDKIADNFTANAWSTGKRFLDSTKLTNLQKTQE DAVKSFQKGDIAGGIEKTLNLNPPQQRGDEDH
Sequences:
>Translated_112_residues MDQALAEGASATAEGFNDDVSTTFKIKEVTQIVNEIKDGDPKKLSQSIDKIADNFTANAWSTGKRFLDSTKLTNLQKTQE DAVKSFQKGDIAGGIEKTLNLNPPQQRGDEDH >Mature_112_residues MDQALAEGASATAEGFNDDVSTTFKIKEVTQIVNEIKDGDPKKLSQSIDKIADNFTANAWSTGKRFLDSTKLTNLQKTQE DAVKSFQKGDIAGGIEKTLNLNPPQQRGDEDH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12228; Mature: 12228
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQALAEGASATAEGFNDDVSTTFKIKEVTQIVNEIKDGDPKKLSQSIDKIADNFTANAW CCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCH STGKRFLDSTKLTNLQKTQEDAVKSFQKGDIAGGIEKTLNLNPPQQRGDEDH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MDQALAEGASATAEGFNDDVSTTFKIKEVTQIVNEIKDGDPKKLSQSIDKIADNFTANAW CCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCH STGKRFLDSTKLTNLQKTQEDAVKSFQKGDIAGGIEKTLNLNPPQQRGDEDH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA