| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is nadE [H]
Identifier: 148242969
GI number: 148242969
Start: 1629010
End: 1630686
Strand: Direct
Name: nadE [H]
Synonym: SynRCC307_1870
Alternate gene names: 148242969
Gene position: 1629010-1630686 (Clockwise)
Preceding gene: 148242968
Following gene: 148242970
Centisome position: 73.22
GC content: 64.04
Gene sequence:
>1677_bases GTGCGGATCGCACTGATCCAATCCAACCCGCTGGTCGGTGATCTGCAGGGCAATCGGCAACGCCTGCAACAGCAGTGCTT GCAGGCTGCCGAAGCCGGAGCCGAACTCGCCCTGGCCCCTGAACTCGCCCTCTGGGGCTATCCGCCCCGGGATCTGCTGT TGCAGCCGGCCCTACGGCAGCAACAAGACCGCCAACTCGATCAGCTCAGTGGCGCGTTGCCGCCGGGGTTTGGGCTGCTG CTTGGGGTGGTTGAAACCAGTGGCCAGAAGCTTTTCAACGCCATGGCCCTGGTGGAGCGCGGCGGCTGGCGCTTGGTGGC GCGCAAACGGTTGCTGCCCAGTTACGACGTCTTCGATGAACAGCGCTATTTCCACAGCGGTGATCAACCCGCGCTGCTGA GCTGGGGCGGTCAGCGCCTTGGGCTGACCCTGTGCGAAGACCTCTGGGTTGAACCCCAAATCAGCGGCCGCAATGCGCCG CTGTGCGACCCAATTGCTGAACTTCAGCCCCTCAAGCCGGATCTATTGATCAACCTCTCAGCGTCCCCCTTTGGCCAGGG CAAAGCGGAGCGTCGCCGGCAGCTGGCGGGGGCTGCCCAGCAGCGGTTGGGATGCCCAGTGCTCTACGTCAATCAGGTGG GAGGAAACGACGAACTGATTTTTGATGGCAACAGCTTTGTGCTGGATGCCACTGGGGCGCTGCAGCAGCAACTGCCCTGC GGCGAGAGCGCGCTGCAGATTTGGGACAGCCAGAGCGCCACAAGCCCAACCCCACCCGAGCCCCTGAGCCCCGAGGCTCA GCTCTGGCGCATGCTCGTGCTCGGGGTGCAGGACTACGCCCGCAAATGCGGCTTCCGCAAAGCCTTGCTCGGGCTCAGTG GCGGCATTGATTCGGCCCTGGTGGCAGCCCTAGCCGTTGCGGCTCTGGGCAGTCAGCAGGTGCGGGCGCTGTTGATGCCA TCGCCCTACAGCTCTGAAGGCTCGCTGCAGGATTCCCTGGCCCTCGCCAGTCGGTTGAATCTGGCCACCAGCACGGTGCC GATTGAGCCCTTGATGCAGCAATACGACAGCAGCTTGGATCCAGCGCTGGGGCAGAAGCCCGAGGGCATCACCGCCGAAA ACCTGCAATCGCGCATCCGCGGCACGTTGCTGATGGCCGTGGCCAATAGCGAAGGCCAACTGCTGCTAGCGACCGGCAAC AAATCCGAGCTGGCCGTTGGTTACTGCACGCTCTACGGCGACATGAATGGCGGCCTGGCCGTCATTGGGGATCTCTACAA AAGCGAGGTGTTTCGGCTGACGCGCTGGCTCGATAGCCCGGCTGCTGCCGGCGAGCGGCAACGCTGCGGGCTGCCAGCCG ATGGGCCGGTGATCGGGGACGCGATCTTGAATAAGCCGCCCAGCGCCGAGCTGAGACCGGATCAAAAAGACAGCGACTCC CTGCCCGACTACCCCTATCTCGATCGCCTACTGCAGCGCTTTATCGAGGAGCATGCCTCGCCGGAAGAGCTCATCGCCAG CGGGGAGCCGAGCGACGCCGTGCAGCGGATCTGGCGGCTGCTGAAACGGTCAGAATTCAAACGGCGCCAAGCTGCACCGG TGCTCAAACTGAGTGCTCGCTCCTTCGGTTGCGGTTGGCGCATGCCAATCTCCGCCAGAACTGGCGCCGAAGGCTAG
Upstream 100 bases:
>100_bases TCAGTGCGGCATCACCCCAACCCCGAACTGGTCCCCAGCGAGTTGCTCACGGACTTAGCGCAGCGAAACCTTTACGGTTT CAGCATCGACGACCTCCCCT
Downstream 100 bases:
>100_bases GAATCGCCAGGCTGATAGCAGAACCAACCCACCATGGCCGCTCCCCAACCCGCCGCCTCGATGAGCAGCATCGGCATTCC TCGGGAGATCAAGCCCGATG
Product: glutamine-dependent NAD(+) synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MRIALIQSNPLVGDLQGNRQRLQQQCLQAAEAGAELALAPELALWGYPPRDLLLQPALRQQQDRQLDQLSGALPPGFGLL LGVVETSGQKLFNAMALVERGGWRLVARKRLLPSYDVFDEQRYFHSGDQPALLSWGGQRLGLTLCEDLWVEPQISGRNAP LCDPIAELQPLKPDLLINLSASPFGQGKAERRRQLAGAAQQRLGCPVLYVNQVGGNDELIFDGNSFVLDATGALQQQLPC GESALQIWDSQSATSPTPPEPLSPEAQLWRMLVLGVQDYARKCGFRKALLGLSGGIDSALVAALAVAALGSQQVRALLMP SPYSSEGSLQDSLALASRLNLATSTVPIEPLMQQYDSSLDPALGQKPEGITAENLQSRIRGTLLMAVANSEGQLLLATGN KSELAVGYCTLYGDMNGGLAVIGDLYKSEVFRLTRWLDSPAAAGERQRCGLPADGPVIGDAILNKPPSAELRPDQKDSDS LPDYPYLDRLLQRFIEEHASPEELIASGEPSDAVQRIWRLLKRSEFKRRQAAPVLKLSARSFGCGWRMPISARTGAEG
Sequences:
>Translated_558_residues MRIALIQSNPLVGDLQGNRQRLQQQCLQAAEAGAELALAPELALWGYPPRDLLLQPALRQQQDRQLDQLSGALPPGFGLL LGVVETSGQKLFNAMALVERGGWRLVARKRLLPSYDVFDEQRYFHSGDQPALLSWGGQRLGLTLCEDLWVEPQISGRNAP LCDPIAELQPLKPDLLINLSASPFGQGKAERRRQLAGAAQQRLGCPVLYVNQVGGNDELIFDGNSFVLDATGALQQQLPC GESALQIWDSQSATSPTPPEPLSPEAQLWRMLVLGVQDYARKCGFRKALLGLSGGIDSALVAALAVAALGSQQVRALLMP SPYSSEGSLQDSLALASRLNLATSTVPIEPLMQQYDSSLDPALGQKPEGITAENLQSRIRGTLLMAVANSEGQLLLATGN KSELAVGYCTLYGDMNGGLAVIGDLYKSEVFRLTRWLDSPAAAGERQRCGLPADGPVIGDAILNKPPSAELRPDQKDSDS LPDYPYLDRLLQRFIEEHASPEELIASGEPSDAVQRIWRLLKRSEFKRRQAAPVLKLSARSFGCGWRMPISARTGAEG >Mature_558_residues MRIALIQSNPLVGDLQGNRQRLQQQCLQAAEAGAELALAPELALWGYPPRDLLLQPALRQQQDRQLDQLSGALPPGFGLL LGVVETSGQKLFNAMALVERGGWRLVARKRLLPSYDVFDEQRYFHSGDQPALLSWGGQRLGLTLCEDLWVEPQISGRNAP LCDPIAELQPLKPDLLINLSASPFGQGKAERRRQLAGAAQQRLGCPVLYVNQVGGNDELIFDGNSFVLDATGALQQQLPC GESALQIWDSQSATSPTPPEPLSPEAQLWRMLVLGVQDYARKCGFRKALLGLSGGIDSALVAALAVAALGSQQVRALLMP SPYSSEGSLQDSLALASRLNLATSTVPIEPLMQQYDSSLDPALGQKPEGITAENLQSRIRGTLLMAVANSEGQLLLATGN KSELAVGYCTLYGDMNGGLAVIGDLYKSEVFRLTRWLDSPAAAGERQRCGLPADGPVIGDAILNKPPSAELRPDQKDSDS LPDYPYLDRLLQRFIEEHASPEELIASGEPSDAVQRIWRLLKRSEFKRRQAAPVLKLSARSFGCGWRMPISARTGAEG
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 60452; Mature: 60452
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIALIQSNPLVGDLQGNRQRLQQQCLQAAEAGAELALAPELALWGYPPRDLLLQPALRQ CEEEEEECCCCEECCCCCHHHHHHHHHHHHHCCCCEEECCCHHHCCCCCHHHHHCHHHHH QQDRQLDQLSGALPPGFGLLLGVVETSGQKLFNAMALVERGGWRLVARKRLLPSYDVFDE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCHH QRYFHSGDQPALLSWGGQRLGLTLCEDLWVEPQISGRNAPLCDPIAELQPLKPDLLINLS HHHHCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEC ASPFGQGKAERRRQLAGAAQQRLGCPVLYVNQVGGNDELIFDGNSFVLDATGALQQQLPC CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCEEEEECCHHHHHHCCC GESALQIWDSQSATSPTPPEPLSPEAQLWRMLVLGVQDYARKCGFRKALLGLSGGIDSAL CHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHH VAALAVAALGSQQVRALLMPSPYSSEGSLQDSLALASRLNLATSTVPIEPLMQQYDSSLD HHHHHHHHHCCHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC PALGQKPEGITAENLQSRIRGTLLMAVANSEGQLLLATGNKSELAVGYCTLYGDMNGGLA CCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCEEEEEEEEEECCCCCHH VIGDLYKSEVFRLTRWLDSPAAAGERQRCGLPADGPVIGDAILNKPPSAELRPDQKDSDS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECHHHHCCCCCCCCCCCCCCCCC LPDYPYLDRLLQRFIEEHASPEELIASGEPSDAVQRIWRLLKRSEFKRRQAAPVLKLSAR CCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCC SFGCGWRMPISARTGAEG CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRIALIQSNPLVGDLQGNRQRLQQQCLQAAEAGAELALAPELALWGYPPRDLLLQPALRQ CEEEEEECCCCEECCCCCHHHHHHHHHHHHHCCCCEEECCCHHHCCCCCHHHHHCHHHHH QQDRQLDQLSGALPPGFGLLLGVVETSGQKLFNAMALVERGGWRLVARKRLLPSYDVFDE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCHH QRYFHSGDQPALLSWGGQRLGLTLCEDLWVEPQISGRNAPLCDPIAELQPLKPDLLINLS HHHHCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEC ASPFGQGKAERRRQLAGAAQQRLGCPVLYVNQVGGNDELIFDGNSFVLDATGALQQQLPC CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCEEEEECCHHHHHHCCC GESALQIWDSQSATSPTPPEPLSPEAQLWRMLVLGVQDYARKCGFRKALLGLSGGIDSAL CHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHH VAALAVAALGSQQVRALLMPSPYSSEGSLQDSLALASRLNLATSTVPIEPLMQQYDSSLD HHHHHHHHHCCHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC PALGQKPEGITAENLQSRIRGTLLMAVANSEGQLLLATGNKSELAVGYCTLYGDMNGGLA CCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCEEEEEEEEEECCCCCHH VIGDLYKSEVFRLTRWLDSPAAAGERQRCGLPADGPVIGDAILNKPPSAELRPDQKDSDS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECHHHHCCCCCCCCCCCCCCCCC LPDYPYLDRLLQRFIEEHASPEELIASGEPSDAVQRIWRLLKRSEFKRRQAAPVLKLSAR CCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCC SFGCGWRMPISARTGAEG CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]