| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is gph
Identifier: 148242963
GI number: 148242963
Start: 1622832
End: 1623581
Strand: Direct
Name: gph
Synonym: SynRCC307_1864
Alternate gene names: NA
Gene position: 1622832-1623581 (Clockwise)
Preceding gene: 148242961
Following gene: 148242964
Centisome position: 72.94
GC content: 60.93
Gene sequence:
>750_bases GTGGTGCTGTTCGACATCGATGGCGTGATCCGCGATGTCTCTGGCAGCTACCGCCGGGCCTTGGTGGAAACGGTGCATCA CTACAGCCATTGGCGGCCCGATGTCGCCTGTGTGGATGCCCTCAAAGGGGAGGGACGCTGGAACAACGATTGGGACGCCA GCTTGGAGCTCTTGCGCCGTCAAGGCGTTGCGTTGCCCGAGCGAGATGCCTTGGTGGCGGTGTTCAGCAGTTTTTATTTC GGCGGCGATCCCGACGGGGAGCCCAGCCAATGGCAAGGGTTCATTGGCAGTGAGCCCCTGCTGGTGGAACCCCATTTTTT TGCTCAGCTGAGTGCCAAGGGATGCCGCTGGGGATTTGTCAGCGGCGCTGAACCGCCATCAGCCCGCTACGTGCTGCAGC AACGACTGCAACTGCAGCAGCCACCGCTGATTGCCATGGGCGATGCACCAGACAAACCCGATCCCACCGGGTTGATCCGC CTCAGCGACCAATTACGCCCAACCCCTGAAACCCCAGTGCTCTATCTCGGCGACACCGTTGCCGATGTGCAAACCGTGAT CCAAGCCCGGCAACAACGACCTGAGCAGCCCTGGCTGAGCCTGGCGGTGGCACCTCCCCACCTGCATGGCCAAACCCAAG CGCGGCAGGCCTATGAGCAGCAACTACTGCAGGCCGGTGCCGATCACATCCTGGGCAGCACTCCAGAGCTGCTTTTTTTC ATTGATCAGCTGACAATCCCTCAACACTGA
Upstream 100 bases:
>100_bases CTCGTTTCGGTGCTCAAGGGAGGTACAGCGAAAGACCTGGCGGGGCAGGCAAACGACTAACCTACCAGCCCCCGCATCAC CACCCATCGCTCCAGCTCCC
Downstream 100 bases:
>100_bases GTTCAAGGTGTGGAGGACAACCGTCCTGCTGCGTTGAATCGCCTGCGCCTTCTGCTGCCTGAGCTCGCCACGCTCTCCAT GGGAGCGGGCGTGCTGGCGC
Product: HAD superfamily phosphatase
Products: 3-(imidazol-4-yl)-2-oxopropyl phosphate; H2O
Alternate protein names: HAD Superfamily Hydrolase; HAD Family Hydrolase; HAD Superfamily Phosphatase; HAD Superfamily Hydrolase TIGR
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MVLFDIDGVIRDVSGSYRRALVETVHHYSHWRPDVACVDALKGEGRWNNDWDASLELLRRQGVALPERDALVAVFSSFYF GGDPDGEPSQWQGFIGSEPLLVEPHFFAQLSAKGCRWGFVSGAEPPSARYVLQQRLQLQQPPLIAMGDAPDKPDPTGLIR LSDQLRPTPETPVLYLGDTVADVQTVIQARQQRPEQPWLSLAVAPPHLHGQTQARQAYEQQLLQAGADHILGSTPELLFF IDQLTIPQH
Sequences:
>Translated_249_residues MVLFDIDGVIRDVSGSYRRALVETVHHYSHWRPDVACVDALKGEGRWNNDWDASLELLRRQGVALPERDALVAVFSSFYF GGDPDGEPSQWQGFIGSEPLLVEPHFFAQLSAKGCRWGFVSGAEPPSARYVLQQRLQLQQPPLIAMGDAPDKPDPTGLIR LSDQLRPTPETPVLYLGDTVADVQTVIQARQQRPEQPWLSLAVAPPHLHGQTQARQAYEQQLLQAGADHILGSTPELLFF IDQLTIPQH >Mature_249_residues MVLFDIDGVIRDVSGSYRRALVETVHHYSHWRPDVACVDALKGEGRWNNDWDASLELLRRQGVALPERDALVAVFSSFYF GGDPDGEPSQWQGFIGSEPLLVEPHFFAQLSAKGCRWGFVSGAEPPSARYVLQQRLQLQQPPLIAMGDAPDKPDPTGLIR LSDQLRPTPETPVLYLGDTVADVQTVIQARQQRPEQPWLSLAVAPPHLHGQTQARQAYEQQLLQAGADHILGSTPELLFF IDQLTIPQH
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.2.1.19
Molecular weight: Translated: 27759; Mature: 27759
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLFDIDGVIRDVSGSYRRALVETVHHYSHWRPDVACVDALKGEGRWNNDWDASLELLRR CEEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHH QGVALPERDALVAVFSSFYFGGDPDGEPSQWQGFIGSEPLLVEPHFFAQLSAKGCRWGFV CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEECCHHHHHHCCCCCCCCCC SGAEPPSARYVLQQRLQLQQPPLIAMGDAPDKPDPTGLIRLSDQLRPTPETPVLYLGDTV CCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEECCHH ADVQTVIQARQQRPEQPWLSLAVAPPHLHGQTQARQAYEQQLLQAGADHILGSTPELLFF HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHCCCCHHHHHH IDQLTIPQH HHHHCCCCC >Mature Secondary Structure MVLFDIDGVIRDVSGSYRRALVETVHHYSHWRPDVACVDALKGEGRWNNDWDASLELLRR CEEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHH QGVALPERDALVAVFSSFYFGGDPDGEPSQWQGFIGSEPLLVEPHFFAQLSAKGCRWGFV CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEECCHHHHHHCCCCCCCCCC SGAEPPSARYVLQQRLQLQQPPLIAMGDAPDKPDPTGLIRLSDQLRPTPETPVLYLGDTV CCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEECCHH ADVQTVIQARQQRPEQPWLSLAVAPPHLHGQTQARQAYEQQLLQAGADHILGSTPELLFF HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHCCCCHHHHHH IDQLTIPQH HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate
Specific reaction: D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA