| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is nblS [H]
Identifier: 148242922
GI number: 148242922
Start: 1586479
End: 1588413
Strand: Direct
Name: nblS [H]
Synonym: SynRCC307_1823
Alternate gene names: 148242922
Gene position: 1586479-1588413 (Clockwise)
Preceding gene: 148242921
Following gene: 148242926
Centisome position: 71.31
GC content: 62.38
Gene sequence:
>1935_bases CTGCCAGCCCTCACCAGCGGCTGGTGGGCGGAGTTCAGCCTGCAGACCAAGTTGTTGGCCATCGCCACCTTGGTGGTCAG CATCGTGATGACGGGGCTGACCTTCTTTGCCCTCAACGGCATTCAGACCGAAGCCCGCATGGGCGATACCCGCTACGCCC GCGACCTGGGTTTGCTGCTGGCGAGCAACGTGACCCCATTGGCGGCTCAGGGCAATGACCGCGAGCTAGCCCGGGTCACC GAAGAGTTCTGGCGCAGCAGCCGCAGCCTTCGCTACATCTTTTATGCCGACCCCGAGGGAGTGATCTACCTCGGCATCCC GATCAGCAAGGTTGATAGCGGCAACGATCTACTGCTCAGCCGCCGGCTGGAACTGCCCTCTGACCTGCGTCAGCGCCCCC AAAACCCTCTGATCCGCCAACACCTCACACCCGATGGGTTGGTCACCGACGTGTTCGTGCCGATGGTCAACGGCAAGAAC TACCTCGGCGTGATGGCCCTGGGCGTCAATCCCAACGAAGCGGTGCTGGCCACAGCAGCCCTCACCCGCAATGTGACGGT GGCGGTGTTCGTGTCGATCTGGGTGCTGGTGATCTTGGGCGCGGTGTTTAACGCCCTCACCATCACGCGGCCGGTGAAAG AGCTGCTGCGCGGGGTGCGCTCAGTTGCCGATGGCGACTTCGGCGCGCGAATCGCTCTGCCGGTGGGCGGTGAGCTCGGT GAGCTGCTCAATGGTTTCAACACCATGGCCACCCAATTGGAGGCCTACGACGAAGCCAATATCGAGGAGCTCACCGCTGC CCAGGTGAAACAACAGTCGCTGATTGCCACCATGGCCGATGGCGCCCTGCTGCTTGATCCGGAGGGGCAGGTGGTGCTGG TGAATCCAACAGCGCGGCGGCTGTTTCGCTGGGAGGGCCGCAAGCTGGAGGGCCAAGAGCTGCTCAGACTGCTGCCCGAC AGCCTCACGATGGAGCTGCAGGAGCCATTCGATGCGGTGCGCAGCCGTGAGCGGGACAGCGCTGAGGTGCGCTGCTCGAT CAATGAACCCAACCGCACCTTGCGCTTGGTGCTGCAAGCGGTGCGCGATGGCAGCGGCGAGACCCTTAAAGGGATTGCCG TCACCGTTCAAGATCTAACGCGGGAGGTGGAGCTCAATGCAGCCCAGAGCCGTTTCATCAGCAACGTCTCCCATGAGCTG CGGACGCCGCTCTTCAACATCAAGAGCTACGTGGAAACCCTCCACGACATGGGCGACCAGCTTGATGAGGAGATGACCCG TGAGTTCCTGGCGACCGCCAATGCCGAAACCGATCGCCTCACCCGCTTAGTGAATGACGTGCTCGATCTCTCCAGGCTGG AGTCCGATCGGGTCTGGAGCTTTGAGCCCACCGAGGTGGAAGCCGCGATGGAGCAAACCCTGCGCACCTACAAACTCAAC GCGGATGACAAAGGCGTCAGCCTTGATTTGGCCGTGCCACCCTCATTGCCGCGCGTCCGCGGCAATTACGACCTCCTGCT GCAGGTGTTCGACAACCTGGTAGGCAACGCAGTGAAGTTCAGCACCTCCGGCGACATGGTGCAGCTGCGGGCCTATCTAT GGCCAGACACCTGCCCGATCAAAGCGGATGACGCCAGCTCCCCGCTGCCGCGTCTACGCGTGGAGGTGGCCGACAGCGGA ACCGGCATCAGCGAAGAGGATTGCCGGCGGGTGTTTGAACGCTTCTACCGCGTTGAAAACGCTGTCCACACCGAAGCCGG AACCGGCCTCGGCCTCTCGATCGTGCGGGGCATCCTGCAGAAGCACGGCAGCGATATTTCAATGGTGAGCGAGCTGGGCG TGGGTACCACCTTCTGGTTCGATCTCCCCCTCGAGGGAGCCGATGAGGATGAGTTGATCGTCAACGCCGAACGCAAAGCG TTGGCGTTGAGCTGA
Upstream 100 bases:
>100_bases CGACATCGGCCATCAGGTGCGGCGTCTTTAGGCTGAGAGCAACCAAACCGGTCACCTGAGCAACTCCGCCGCTACTGAAA CGCTGCCGTGGTGGCGCCGG
Downstream 100 bases:
>100_bases TCTAACCAGGCTCGCTGTCGACGCCGCGGACAATGCGTGCCAACTCGTTGCGCTCGTCGGTGGTGATGCGGTGGGGCACA CCACTGATGATCCGCTCGAA
Product: two-component system sensor histidine kinase NblS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 644; Mature: 643
Protein sequence:
>644_residues MPALTSGWWAEFSLQTKLLAIATLVVSIVMTGLTFFALNGIQTEARMGDTRYARDLGLLLASNVTPLAAQGNDRELARVT EEFWRSSRSLRYIFYADPEGVIYLGIPISKVDSGNDLLLSRRLELPSDLRQRPQNPLIRQHLTPDGLVTDVFVPMVNGKN YLGVMALGVNPNEAVLATAALTRNVTVAVFVSIWVLVILGAVFNALTITRPVKELLRGVRSVADGDFGARIALPVGGELG ELLNGFNTMATQLEAYDEANIEELTAAQVKQQSLIATMADGALLLDPEGQVVLVNPTARRLFRWEGRKLEGQELLRLLPD SLTMELQEPFDAVRSRERDSAEVRCSINEPNRTLRLVLQAVRDGSGETLKGIAVTVQDLTREVELNAAQSRFISNVSHEL RTPLFNIKSYVETLHDMGDQLDEEMTREFLATANAETDRLTRLVNDVLDLSRLESDRVWSFEPTEVEAAMEQTLRTYKLN ADDKGVSLDLAVPPSLPRVRGNYDLLLQVFDNLVGNAVKFSTSGDMVQLRAYLWPDTCPIKADDASSPLPRLRVEVADSG TGISEEDCRRVFERFYRVENAVHTEAGTGLGLSIVRGILQKHGSDISMVSELGVGTTFWFDLPLEGADEDELIVNAERKA LALS
Sequences:
>Translated_644_residues MPALTSGWWAEFSLQTKLLAIATLVVSIVMTGLTFFALNGIQTEARMGDTRYARDLGLLLASNVTPLAAQGNDRELARVT EEFWRSSRSLRYIFYADPEGVIYLGIPISKVDSGNDLLLSRRLELPSDLRQRPQNPLIRQHLTPDGLVTDVFVPMVNGKN YLGVMALGVNPNEAVLATAALTRNVTVAVFVSIWVLVILGAVFNALTITRPVKELLRGVRSVADGDFGARIALPVGGELG ELLNGFNTMATQLEAYDEANIEELTAAQVKQQSLIATMADGALLLDPEGQVVLVNPTARRLFRWEGRKLEGQELLRLLPD SLTMELQEPFDAVRSRERDSAEVRCSINEPNRTLRLVLQAVRDGSGETLKGIAVTVQDLTREVELNAAQSRFISNVSHEL RTPLFNIKSYVETLHDMGDQLDEEMTREFLATANAETDRLTRLVNDVLDLSRLESDRVWSFEPTEVEAAMEQTLRTYKLN ADDKGVSLDLAVPPSLPRVRGNYDLLLQVFDNLVGNAVKFSTSGDMVQLRAYLWPDTCPIKADDASSPLPRLRVEVADSG TGISEEDCRRVFERFYRVENAVHTEAGTGLGLSIVRGILQKHGSDISMVSELGVGTTFWFDLPLEGADEDELIVNAERKA LALS >Mature_643_residues PALTSGWWAEFSLQTKLLAIATLVVSIVMTGLTFFALNGIQTEARMGDTRYARDLGLLLASNVTPLAAQGNDRELARVTE EFWRSSRSLRYIFYADPEGVIYLGIPISKVDSGNDLLLSRRLELPSDLRQRPQNPLIRQHLTPDGLVTDVFVPMVNGKNY LGVMALGVNPNEAVLATAALTRNVTVAVFVSIWVLVILGAVFNALTITRPVKELLRGVRSVADGDFGARIALPVGGELGE LLNGFNTMATQLEAYDEANIEELTAAQVKQQSLIATMADGALLLDPEGQVVLVNPTARRLFRWEGRKLEGQELLRLLPDS LTMELQEPFDAVRSRERDSAEVRCSINEPNRTLRLVLQAVRDGSGETLKGIAVTVQDLTREVELNAAQSRFISNVSHELR TPLFNIKSYVETLHDMGDQLDEEMTREFLATANAETDRLTRLVNDVLDLSRLESDRVWSFEPTEVEAAMEQTLRTYKLNA DDKGVSLDLAVPPSLPRVRGNYDLLLQVFDNLVGNAVKFSTSGDMVQLRAYLWPDTCPIKADDASSPLPRLRVEVADSGT GISEEDCRRVFERFYRVENAVHTEAGTGLGLSIVRGILQKHGSDISMVSELGVGTTFWFDLPLEGADEDELIVNAERKAL ALS
Specific function: Member Of The Two-Component Regulatory System Uvry/Bara Involved In The Regulation Of Carbon Metabolism Via The Csra/Csrb Regulatory System. Phosphorylates Uvry, Probably Via A Four-Step Phosphorelay. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=259, Percent_Identity=31.6602316602317, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1786600, Length=402, Percent_Identity=28.8557213930348, Blast_Score=107, Evalue=3e-24, Organism=Escherichia coli, GI1788393, Length=265, Percent_Identity=30.5660377358491, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI1788713, Length=263, Percent_Identity=28.1368821292776, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788549, Length=402, Percent_Identity=23.8805970149254, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI145693157, Length=261, Percent_Identity=31.0344827586207, Blast_Score=102, Evalue=6e-23, Organism=Escherichia coli, GI48994928, Length=239, Percent_Identity=30.9623430962343, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1790346, Length=240, Percent_Identity=29.1666666666667, Blast_Score=86, Evalue=9e-18, Organism=Escherichia coli, GI1790436, Length=255, Percent_Identity=24.3137254901961, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI87081816, Length=244, Percent_Identity=30.7377049180328, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI87082128, Length=242, Percent_Identity=26.0330578512397, Blast_Score=83, Evalue=6e-17, Organism=Escherichia coli, GI1786783, Length=238, Percent_Identity=25.6302521008403, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1789403, Length=231, Percent_Identity=29.4372294372294, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1788279, Length=235, Percent_Identity=24.2553191489362, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1786912, Length=251, Percent_Identity=27.0916334661355, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1790861, Length=253, Percent_Identity=24.5059288537549, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 71125; Mature: 70994
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALTSGWWAEFSLQTKLLAIATLVVSIVMTGLTFFALNGIQTEARMGDTRYARDLGLLL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHH ASNVTPLAAQGNDRELARVTEEFWRSSRSLRYIFYADPEGVIYLGIPISKVDSGNDLLLS HCCCCCEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCHHCCCCCCCEEEE RRLELPSDLRQRPQNPLIRQHLTPDGLVTDVFVPMVNGKNYLGVMALGVNPNEAVLATAA ECCCCCHHHHHCCCCCHHHHCCCCCCCHHHHHEEEECCCCEEEEEEECCCCCHHHEEHHH LTRNVTVAVFVSIWVLVILGAVFNALTITRPVKELLRGVRSVADGDFGARIALPVGGELG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH ELLNGFNTMATQLEAYDEANIEELTAAQVKQQSLIATMADGALLLDPEGQVVLVNPTARR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECHHHHH LFRWEGRKLEGQELLRLLPDSLTMELQEPFDAVRSRERDSAEVRCSINEPNRTLRLVLQA HHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHH VRDGSGETLKGIAVTVQDLTREVELNAAQSRFISNVSHELRTPLFNIKSYVETLHDMGDQ HHCCCCCEEHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH LDEEMTREFLATANAETDRLTRLVNDVLDLSRLESDRVWSFEPTEVEAAMEQTLRTYKLN HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEECC ADDKGVSLDLAVPPSLPRVRGNYDLLLQVFDNLVGNAVKFSTSGDMVQLRAYLWPDTCPI CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCEEEEEEEECCCCCCC KADDASSPLPRLRVEVADSGTGISEEDCRRVFERFYRVENAVHTEAGTGLGLSIVRGILQ CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH KHGSDISMVSELGVGTTFWFDLPLEGADEDELIVNAERKALALS HCCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCHHEECC >Mature Secondary Structure PALTSGWWAEFSLQTKLLAIATLVVSIVMTGLTFFALNGIQTEARMGDTRYARDLGLLL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHH ASNVTPLAAQGNDRELARVTEEFWRSSRSLRYIFYADPEGVIYLGIPISKVDSGNDLLLS HCCCCCEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCHHCCCCCCCEEEE RRLELPSDLRQRPQNPLIRQHLTPDGLVTDVFVPMVNGKNYLGVMALGVNPNEAVLATAA ECCCCCHHHHHCCCCCHHHHCCCCCCCHHHHHEEEECCCCEEEEEEECCCCCHHHEEHHH LTRNVTVAVFVSIWVLVILGAVFNALTITRPVKELLRGVRSVADGDFGARIALPVGGELG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH ELLNGFNTMATQLEAYDEANIEELTAAQVKQQSLIATMADGALLLDPEGQVVLVNPTARR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECHHHHH LFRWEGRKLEGQELLRLLPDSLTMELQEPFDAVRSRERDSAEVRCSINEPNRTLRLVLQA HHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHH VRDGSGETLKGIAVTVQDLTREVELNAAQSRFISNVSHELRTPLFNIKSYVETLHDMGDQ HHCCCCCEEHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH LDEEMTREFLATANAETDRLTRLVNDVLDLSRLESDRVWSFEPTEVEAAMEQTLRTYKLN HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEECC ADDKGVSLDLAVPPSLPRVRGNYDLLLQVFDNLVGNAVKFSTSGDMVQLRAYLWPDTCPI CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCEEEEEEEECCCCCCC KADDASSPLPRLRVEVADSGTGISEEDCRRVFERFYRVENAVHTEAGTGLGLSIVRGILQ CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH KHGSDISMVSELGVGTTFWFDLPLEGADEDELIVNAERKALALS HCCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8535519; 8905231; 3141423 [H]