| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242875
Identifier: 148242875
GI number: 148242875
Start: 1547938
End: 1548102
Strand: Direct
Name: 148242875
Synonym: SynRCC307_1776
Alternate gene names: NA
Gene position: 1547938-1548102 (Clockwise)
Preceding gene: 148242872
Following gene: 148242880
Centisome position: 69.57
GC content: 56.97
Gene sequence:
>165_bases ATGACCAACCCCGATCAGCAGCCAGCCAAGCGGCGGGCCTTCTCCTACACGGAGATGATGAACTCAGGCCAGCAGCAGCT GAGCAACGAGCAAATCGCAGCGCTGGAGCAACAAGCGAAAGCCACCTCCAAAGAGAACGAGACTCCACCAACAACAAAAC CCTGA
Upstream 100 bases:
>100_bases ACTCGAGATGAACGTTCGCTCCATACCTCGGCCCATTCGTGCTTTCAATCTGACTTCCACACCAAGGAATGCAAGCTTTA TTGCGTTCTATCTCCAAGCC
Downstream 100 bases:
>100_bases GCAGAGCCAGGGCTTTGTTGCTTTGCGTTGATGCCCACAGCTGGTGGGCGATGCATCACCAACCCGCAGGAGCCATGACC GCCGGGGGCTGGGCATACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 53
Protein sequence:
>54_residues MTNPDQQPAKRRAFSYTEMMNSGQQQLSNEQIAALEQQAKATSKENETPPTTKP
Sequences:
>Translated_54_residues MTNPDQQPAKRRAFSYTEMMNSGQQQLSNEQIAALEQQAKATSKENETPPTTKP >Mature_53_residues TNPDQQPAKRRAFSYTEMMNSGQQQLSNEQIAALEQQAKATSKENETPPTTKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6053; Mature: 5922
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPDQQPAKRRAFSYTEMMNSGQQQLSNEQIAALEQQAKATSKENETPPTTKP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TNPDQQPAKRRAFSYTEMMNSGQQQLSNEQIAALEQQAKATSKENETPPTTKP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA