| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242862
Identifier: 148242862
GI number: 148242862
Start: 1542384
End: 1542776
Strand: Direct
Name: 148242862
Synonym: SynRCC307_1763
Alternate gene names: NA
Gene position: 1542384-1542776 (Clockwise)
Preceding gene: 148242861
Following gene: 148242864
Centisome position: 69.32
GC content: 54.45
Gene sequence:
>393_bases ATGAGCAGCTTCGATAGCAACACCCCTTTCATGTTGCTGGCACGGATCCACGTGAAGCCTGGCTGTGTGGAGGACTATTT AGAACTCGCCAGAGCGACTGATGCCGCGGTCGAGAGCACTGAGCCAGGCATGCTCCACCACACCTTTGACCAGGATCCAG ATGATCCTCAAGCTTTTGTCTGGTCAGAGGTCTATGCGAACGATGCTGCTTTTGAGGCCCACGTCACCAACCCTCCCGTG CAGGAATACCTGCAGAAGCACGCTGAACTAGGTGATGGTTTCAGCGTTGAGGTGTACGGAACCGTTGGCAGCGAGTGCCA GGCATTGATGGAATCCTTCGGCCTGCCGCTAAAAATTTTCCAAACCAAACTGGGCTACAGCCGAGTTGTCTGA
Upstream 100 bases:
>100_bases CAACAAAACGGCCTGCAGTCGTCAGGAATTGGTTGCACGACAGATCACACCTCTTTCACGTCAAAAGTGGGACAGTGGAG CGAGGCAACCACATCCCCGC
Downstream 100 bases:
>100_bases TAGGTGGCTTGGGATCACTCTTAGCGGCCTTCCCAGACCCAGCGGCGTGGCCGTTCGCCGCACTCTTTATTGATGTTCAG CTGTTCGTTGGCATCCCATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSSFDSNTPFMLLARIHVKPGCVEDYLELARATDAAVESTEPGMLHHTFDQDPDDPQAFVWSEVYANDAAFEAHVTNPPV QEYLQKHAELGDGFSVEVYGTVGSECQALMESFGLPLKIFQTKLGYSRVV
Sequences:
>Translated_130_residues MSSFDSNTPFMLLARIHVKPGCVEDYLELARATDAAVESTEPGMLHHTFDQDPDDPQAFVWSEVYANDAAFEAHVTNPPV QEYLQKHAELGDGFSVEVYGTVGSECQALMESFGLPLKIFQTKLGYSRVV >Mature_129_residues SSFDSNTPFMLLARIHVKPGCVEDYLELARATDAAVESTEPGMLHHTFDQDPDDPQAFVWSEVYANDAAFEAHVTNPPVQ EYLQKHAELGDGFSVEVYGTVGSECQALMESFGLPLKIFQTKLGYSRVV
Specific function: Unknown
COG id: COG1359
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14401; Mature: 14270
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFDSNTPFMLLARIHVKPGCVEDYLELARATDAAVESTEPGMLHHTFDQDPDDPQAFV CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHH WSEVYANDAAFEAHVTNPPVQEYLQKHAELGDGFSVEVYGTVGSECQALMESFGLPLKIF HHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCHHHH QTKLGYSRVV HHHCCHHCCC >Mature Secondary Structure SSFDSNTPFMLLARIHVKPGCVEDYLELARATDAAVESTEPGMLHHTFDQDPDDPQAFV CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHH WSEVYANDAAFEAHVTNPPVQEYLQKHAELGDGFSVEVYGTVGSECQALMESFGLPLKIF HHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCHHHH QTKLGYSRVV HHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA