| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242861
Identifier: 148242861
GI number: 148242861
Start: 1541789
End: 1542142
Strand: Direct
Name: 148242861
Synonym: SynRCC307_1762
Alternate gene names: NA
Gene position: 1541789-1542142 (Clockwise)
Preceding gene: 148242857
Following gene: 148242862
Centisome position: 69.3
GC content: 59.04
Gene sequence:
>354_bases GTGCGGTTAACCCTCTCGTTCGACACACGCCATACGGCCTATTGCCCGGCTGGGGCGGATCAAGACGTCCGAGGGCACGC TGATCAGCAGCATTCATCGGGTCTGCCCGCCAGGCGCGGCAATCCTGCATCCAATCGGGAGAACCCATGCCCTGGCCTTG TCTCCAGAGCCGCCCCCGTCATGTTGAGCGTGCAGCTGCAGAGTTCTCCGATGACCATTGCACTTGTGTCTGATGCCCTT GCTGACTATCTGACTCACCCACTGGAAGACGTTGATCACTGGTACGCCGAAGACGATGGTCTGTTTGATGCAGAGCCGGG CATTACTGATGAACTAGAGGCGATTGCGGCCTGA
Upstream 100 bases:
>100_bases TTTCGCCGTTCTTGAACTCAGCAACCCACCAAGTAGACATTGGTTTAGATCTATTCAATCAACCGTAAACAGATCGCTCG AGGGATCGGGCTTAAAGACA
Downstream 100 bases:
>100_bases ATCACAACACCACAACGCTGTGATGGCTGGATTGGGACTTCAACGGCAAGGTTTCCAGCGTTCAGCACCTGATGCGCTGA AGCAATAGGACTGCTTGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MRLTLSFDTRHTAYCPAGADQDVRGHADQQHSSGLPARRGNPASNRENPCPGLVSRAAPVMLSVQLQSSPMTIALVSDAL ADYLTHPLEDVDHWYAEDDGLFDAEPGITDELEAIAA
Sequences:
>Translated_117_residues MRLTLSFDTRHTAYCPAGADQDVRGHADQQHSSGLPARRGNPASNRENPCPGLVSRAAPVMLSVQLQSSPMTIALVSDAL ADYLTHPLEDVDHWYAEDDGLFDAEPGITDELEAIAA >Mature_117_residues MRLTLSFDTRHTAYCPAGADQDVRGHADQQHSSGLPARRGNPASNRENPCPGLVSRAAPVMLSVQLQSSPMTIALVSDAL ADYLTHPLEDVDHWYAEDDGLFDAEPGITDELEAIAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12599; Mature: 12599
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTLSFDTRHTAYCPAGADQDVRGHADQQHSSGLPARRGNPASNRENPCPGLVSRAAPV CEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCE MLSVQLQSSPMTIALVSDALADYLTHPLEDVDHWYAEDDGLFDAEPGITDELEAIAA EEEEEECCCCEEEEHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure MRLTLSFDTRHTAYCPAGADQDVRGHADQQHSSGLPARRGNPASNRENPCPGLVSRAAPV CEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCE MLSVQLQSSPMTIALVSDALADYLTHPLEDVDHWYAEDDGLFDAEPGITDELEAIAA EEEEEECCCCEEEEHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA