| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is mprA [H]
Identifier: 148242843
GI number: 148242843
Start: 1526463
End: 1527170
Strand: Direct
Name: mprA [H]
Synonym: SynRCC307_1744
Alternate gene names: 148242843
Gene position: 1526463-1527170 (Clockwise)
Preceding gene: 148242842
Following gene: 148242844
Centisome position: 68.61
GC content: 64.83
Gene sequence:
>708_bases ATGAAGCCCACCTTGCTGCTCATCGGTGAGCGCGCCTTGGAATTGCGCGAGCGGCTGGAGGCTTCCGGCTACGACACCGT GGGCTGGAGCGGCAGCGATGCCGTCCAATCGATTGGAGCCGGGTTGATCCCGCAAGATCGGGTCAAGGCAGTGCTGATCA CCAGCGATGAGCTGGCGGTGGTGCCATTGCTGCAAAAGAGCTGCGGCGCTGGCGATCGGGTGCCGCTGCTGGTGGAGGCG ATGGCCGATGACCTGGCCGCCCGCAGCCAGTGCCTCAAGCTCGGCGCCAACGACTTTTGGGTGCAAGACGGCCCGCCCAG CGATCTGCTGCAGCGCCTCAGGCTCCAACTTGCGCTGGAGCCACGGCCCCACAGCCTGTTTGATGCACCCGCCGGCGACA CCAAGCAGGCAACGTTGAAACTGCTGGATCTACGCCTGGAGCCGCGGCAACGGCGCGCCTGGCGGGGCGAGCGCGAATTG CAGCTCACCGAACGGGAATACTCGCTACTGCTGCTGTTGCTGGAGCACCAAGGCGGCAGCGTCAGCCGCCAAACGATCCT GGAAGAGGTGTGGGGCCAGAGCGATGAGGAGGCCAACGCCAACGTGATTGAGGTGTATGTGCGCTATTTGCGCCGCAAGC TGGAGGAAAACGGCGAACGGCGCTTGATTCACACCGTGCGCGGCGTGGGCTACACGCTCAGGAGCTGA
Upstream 100 bases:
>100_bases TTGTGCGCCTGGCCGACCACGAATACTTCCGCGTATTGGGCGAGAAGCTGGGCTGGGGCCTGCCCCATGTGGCCAAGCCG GGCACACTTCCTTTGGCCTC
Downstream 100 bases:
>100_bases TTCAGGCGATGTTCGCTCCCCTGTTGCCTCTGCTGCTGGCGATCACGCCTCAGTATCTGCCGATCACCGCCAAGTGGTGC CTGCCCCAGGGCTGCATTGG
Product: two-component sytem response regulator
Products: NA
Alternate protein names: Mycobacterial persistence regulator A [H]
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MKPTLLLIGERALELRERLEASGYDTVGWSGSDAVQSIGAGLIPQDRVKAVLITSDELAVVPLLQKSCGAGDRVPLLVEA MADDLAARSQCLKLGANDFWVQDGPPSDLLQRLRLQLALEPRPHSLFDAPAGDTKQATLKLLDLRLEPRQRRAWRGEREL QLTEREYSLLLLLLEHQGGSVSRQTILEEVWGQSDEEANANVIEVYVRYLRRKLEENGERRLIHTVRGVGYTLRS
Sequences:
>Translated_235_residues MKPTLLLIGERALELRERLEASGYDTVGWSGSDAVQSIGAGLIPQDRVKAVLITSDELAVVPLLQKSCGAGDRVPLLVEA MADDLAARSQCLKLGANDFWVQDGPPSDLLQRLRLQLALEPRPHSLFDAPAGDTKQATLKLLDLRLEPRQRRAWRGEREL QLTEREYSLLLLLLEHQGGSVSRQTILEEVWGQSDEEANANVIEVYVRYLRRKLEENGERRLIHTVRGVGYTLRS >Mature_235_residues MKPTLLLIGERALELRERLEASGYDTVGWSGSDAVQSIGAGLIPQDRVKAVLITSDELAVVPLLQKSCGAGDRVPLLVEA MADDLAARSQCLKLGANDFWVQDGPPSDLLQRLRLQLALEPRPHSLFDAPAGDTKQATLKLLDLRLEPRQRRAWRGEREL QLTEREYSLLLLLLEHQGGSVSRQTILEEVWGQSDEEANANVIEVYVRYLRRKLEENGERRLIHTVRGVGYTLRS
Specific function: Member of the two-component regulatory system mprB/mprA which contributes to maintaining a balance among several systems involved in stress resistance and is required for establishment and maintenance of persistent infection in the host. Functions as a tr
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786784, Length=164, Percent_Identity=31.0975609756098, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI87082012, Length=161, Percent_Identity=30.4347826086957, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1789402, Length=163, Percent_Identity=33.7423312883436, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1786599, Length=162, Percent_Identity=24.6913580246914, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786911, Length=159, Percent_Identity=30.8176100628931, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1790552, Length=160, Percent_Identity=31.875, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 26340; Mature: 26340
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTLLLIGERALELRERLEASGYDTVGWSGSDAVQSIGAGLIPQDRVKAVLITSDELAV CCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHCCEEEEECCCEEE VPLLQKSCGAGDRVPLLVEAMADDLAARSQCLKLGANDFWVQDGPPSDLLQRLRLQLALE HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCC PRPHSLFDAPAGDTKQATLKLLDLRLEPRQRRAWRGERELQLTEREYSLLLLLLEHQGGS CCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCEEEHHHHHHEEEEEEECCCCC VSRQTILEEVWGQSDEEANANVIEVYVRYLRRKLEENGERRLIHTVRGVGYTLRS HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MKPTLLLIGERALELRERLEASGYDTVGWSGSDAVQSIGAGLIPQDRVKAVLITSDELAV CCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHCCEEEEECCCEEE VPLLQKSCGAGDRVPLLVEAMADDLAARSQCLKLGANDFWVQDGPPSDLLQRLRLQLALE HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCC PRPHSLFDAPAGDTKQATLKLLDLRLEPRQRRAWRGERELQLTEREYSLLLLLLEHQGGS CCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCEEEHHHHHHEEEEEEECCCCC VSRQTILEEVWGQSDEEANANVIEVYVRYLRRKLEENGERRLIHTVRGVGYTLRS HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA