Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

Click here to switch to the map view.

The map label for this gene is alsD

Identifier: 148242815

GI number: 148242815

Start: 1501613

End: 1502485

Strand: Direct

Name: alsD

Synonym: SynRCC307_1716

Alternate gene names: NA

Gene position: 1501613-1502485 (Clockwise)

Preceding gene: 148242810

Following gene: 148242816

Centisome position: 67.49

GC content: 63.12

Gene sequence:

>873_bases
GTGGAACGCCAAGCCGGACACGACCTGCACCTGCGGCTGCCGCAAGGCCACTGGCAAGCGCTCGAGCGCCATTGCCTTCA
AAGCGGAGAGAGCCATAGCGCGGTGCTGCGCAAAGCCTTGGCCGATTACCTCGATCTCGAACACCACACCCTGTGGCAAC
TCTCCACCTCAACGGCTGTGGTGGAGGGCGTGTTTGGCGGCAGCCTGCAGGTGAAGGATCTCGCTGACCACGGCGACTTC
GGCATCGGCACCTTTGAGCAGCTCGATGGCGAAGGGATCCTGCTCGATGGGATCTGCTGGCAAGCGCGCGCCGATGGCAG
CGTCTGCCGCGCGCCTGCTGATGAAGGCATTCCCTTTTGGGTGGCCACCCACTTCGAAGCCCAGCAGCGCTTCAGCCTCA
GCGGTGTCGACAGCATCGAAGCCCTTGGCGCCCAGCTCGATCCCAAACGCCCCGGCGCCAATTTGTTTGTGGCGATCCGC
ATCAGAGGCCTGTTTAACGAGGTGCTGATGCGCTCCGTCTCCAAGGTGCCCAAGGGCGTGGGCTTGCTGGAAGCCTCCCA
GGATCAAACGATGGTGCGCCGCAACAACATCCGCGGCACCCTGGCGGGCTTTTGGAGCCCAGAGCACACCACCAGCCTCA
ACATCCCCGGCTACCACTTCCATTTCCTGGCTGATGACCACAGCAGTGGCGGCCATGTGTTGGACGTTCAAGCCGCTGAG
CTGCAGGTGGAGCTGGATCTGCAATCCAACCTGCGGCTGGCCCTGCCGCAAACCAAGGAATTCCTCGAAGCTGACCTCAG
CGGCGACATCGCCGCCACGCTGCACACCGCTGAAAGCAAGCCCAAAGACGGAGGCAACGGCAGCGCAGACTGA

Upstream 100 bases:

>100_bases
GAGAGGGATCCAGCATCTGCAAACGCTGAGCGATAAAAAAACGCTAGAGAGAAATCGCCAGGCGTCCACGCCAAGATCAA
AGGGCCACCACAACGCTTCT

Downstream 100 bases:

>100_bases
AGCGATGGTTGAAATCCCCCTGGACTCAATACTGAGCCCCACCCCGGAGGGCTTTCGCTCGGGATTTGTGGCCCTGGTGG
GGCGCCCCAACGTGGGCAAA

Product: Alpha-acetolactate decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MERQAGHDLHLRLPQGHWQALERHCLQSGESHSAVLRKALADYLDLEHHTLWQLSTSTAVVEGVFGGSLQVKDLADHGDF
GIGTFEQLDGEGILLDGICWQARADGSVCRAPADEGIPFWVATHFEAQQRFSLSGVDSIEALGAQLDPKRPGANLFVAIR
IRGLFNEVLMRSVSKVPKGVGLLEASQDQTMVRRNNIRGTLAGFWSPEHTTSLNIPGYHFHFLADDHSSGGHVLDVQAAE
LQVELDLQSNLRLALPQTKEFLEADLSGDIAATLHTAESKPKDGGNGSAD

Sequences:

>Translated_290_residues
MERQAGHDLHLRLPQGHWQALERHCLQSGESHSAVLRKALADYLDLEHHTLWQLSTSTAVVEGVFGGSLQVKDLADHGDF
GIGTFEQLDGEGILLDGICWQARADGSVCRAPADEGIPFWVATHFEAQQRFSLSGVDSIEALGAQLDPKRPGANLFVAIR
IRGLFNEVLMRSVSKVPKGVGLLEASQDQTMVRRNNIRGTLAGFWSPEHTTSLNIPGYHFHFLADDHSSGGHVLDVQAAE
LQVELDLQSNLRLALPQTKEFLEADLSGDIAATLHTAESKPKDGGNGSAD
>Mature_290_residues
MERQAGHDLHLRLPQGHWQALERHCLQSGESHSAVLRKALADYLDLEHHTLWQLSTSTAVVEGVFGGSLQVKDLADHGDF
GIGTFEQLDGEGILLDGICWQARADGSVCRAPADEGIPFWVATHFEAQQRFSLSGVDSIEALGAQLDPKRPGANLFVAIR
IRGLFNEVLMRSVSKVPKGVGLLEASQDQTMVRRNNIRGTLAGFWSPEHTTSLNIPGYHFHFLADDHSSGGHVLDVQAAE
LQVELDLQSNLRLALPQTKEFLEADLSGDIAATLHTAESKPKDGGNGSAD

Specific function: Converts acetolactate into acetoin [H]

COG id: COG3527

COG function: function code Q; Alpha-acetolactate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alpha-acetolactate decarboxylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005128 [H]

Pfam domain/function: PF03306 AAL_decarboxy [H]

EC number: =4.1.1.5 [H]

Molecular weight: Translated: 31550; Mature: 31550

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERQAGHDLHLRLPQGHWQALERHCLQSGESHSAVLRKALADYLDLEHHTLWQLSTSTAV
CCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHE
VEGVFGGSLQVKDLADHGDFGIGTFEQLDGEGILLDGICWQARADGSVCRAPADEGIPFW
EHHHCCCCEEEEECCCCCCCCCCCHHHCCCCEEEEECEEEECCCCCCEEECCCCCCCEEE
VATHFEAQQRFSLSGVDSIEALGAQLDPKRPGANLFVAIRIRGLFNEVLMRSVSKVPKGV
EEECCCHHHHCCCCCCCHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCC
GLLEASQDQTMVRRNNIRGTLAGFWSPEHTTSLNIPGYHFHFLADDHSSGGHVLDVQAAE
EEEECCCCHHHHHHCCCCEEEEECCCCCCCEEECCCCEEEEEEECCCCCCCEEEEEEEEE
LQVELDLQSNLRLALPQTKEFLEADLSGDIAATLHTAESKPKDGGNGSAD
EEEEEEECCCEEEECCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MERQAGHDLHLRLPQGHWQALERHCLQSGESHSAVLRKALADYLDLEHHTLWQLSTSTAV
CCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHE
VEGVFGGSLQVKDLADHGDFGIGTFEQLDGEGILLDGICWQARADGSVCRAPADEGIPFW
EHHHCCCCEEEEECCCCCCCCCCCHHHCCCCEEEEECEEEECCCCCCEEECCCCCCCEEE
VATHFEAQQRFSLSGVDSIEALGAQLDPKRPGANLFVAIRIRGLFNEVLMRSVSKVPKGV
EEECCCHHHHCCCCCCCHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCC
GLLEASQDQTMVRRNNIRGTLAGFWSPEHTTSLNIPGYHFHFLADDHSSGGHVLDVQAAE
EEEECCCCHHHHHHCCCCEEEEECCCCCCCEEECCCCEEEEEEECCCCCCCEEEEEEEEE
LQVELDLQSNLRLALPQTKEFLEADLSGDIAATLHTAESKPKDGGNGSAD
EEEEEEECCCEEEECCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824 [H]