Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242810

Identifier: 148242810

GI number: 148242810

Start: 1495967

End: 1496689

Strand: Direct

Name: 148242810

Synonym: SynRCC307_1711

Alternate gene names: NA

Gene position: 1495967-1496689 (Clockwise)

Preceding gene: 148242809

Following gene: 148242815

Centisome position: 67.24

GC content: 62.79

Gene sequence:

>723_bases
ATGCCGGCCAGCAGTAATTTCCGCGAGGTCATCCGCGACGCGCAAAGCAGCGCGCTGGTGGGACCCAATGTTGTCAATAA
GGCGCTGCCCTACGTGGGTGGCGGCATGGTGCTGACCGCCGCGGGCACCCTCGGCGGCCTGTCGATGATCGCCAGCCCAG
CCTTCATGCCCCTGTTCTGGGTGGCCTTGATCGGCAACCTGGTGCTCTTCTTTGTGGCGCAAAACATTGCCCTTAAGGGC
AACAACGCCACAGCCCTGCCGCTGCTGGCGATCTACAGCCTGATCACCGGCTTCACCTTGAGCGGCTTGGTGGCCATGGC
CATCGGCGTAGCCGGCATCGGTTCGGTGGGCACCGCAGCGATCGCCACAGGCATCACCTTTGTGATCGCCTCGATCATGG
GCCGCCGCATGAGCGACAGCGTTGGTCAGGCCCTTGGCGGTGTGGTGACCCTGGGCATCATCGGCCTGGTGATCGCCATG
GTGGTGCAGCTGATCGGCGGCATCTTTGCCCCGCAGATGTTCCTGGGCGGCGGCTTTGAGCTGATGATCGCGGGCTTCGG
CACCGTGCTGTTCATCGGCGCCGCCTTCCTGGACTTCTACACAATGCCCCGCGTCTACCAGGACGAGCAGTACCTCGCTG
GTGCCCTGGGGATGTATCTGACCTACATCAACCTGTTCATCTTCATCCTGCGCTTCATCATCGCGATCCAAAGCCGCGAC
TGA

Upstream 100 bases:

>100_bases
CGCAAAACCAAGGACGCCGGTGAGGTGATCCGCACGCCTGCAGGCAGCGATCCCTTGGAATCACTGGCAGGATTGGTGGA
GTTTGAAACTCTGATGCGCC

Downstream 100 bases:

>100_bases
GTTTTCAGCTCACTGGGCAACAGCCAACACAGCCGCCGCAATGGCGGCTTTTTGCTGCTCGTCATAACCCCAGCGCGCCA
GAAACTCGACGTCGTCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MPASSNFREVIRDAQSSALVGPNVVNKALPYVGGGMVLTAAGTLGGLSMIASPAFMPLFWVALIGNLVLFFVAQNIALKG
NNATALPLLAIYSLITGFTLSGLVAMAIGVAGIGSVGTAAIATGITFVIASIMGRRMSDSVGQALGGVVTLGIIGLVIAM
VVQLIGGIFAPQMFLGGGFELMIAGFGTVLFIGAAFLDFYTMPRVYQDEQYLAGALGMYLTYINLFIFILRFIIAIQSRD

Sequences:

>Translated_240_residues
MPASSNFREVIRDAQSSALVGPNVVNKALPYVGGGMVLTAAGTLGGLSMIASPAFMPLFWVALIGNLVLFFVAQNIALKG
NNATALPLLAIYSLITGFTLSGLVAMAIGVAGIGSVGTAAIATGITFVIASIMGRRMSDSVGQALGGVVTLGIIGLVIAM
VVQLIGGIFAPQMFLGGGFELMIAGFGTVLFIGAAFLDFYTMPRVYQDEQYLAGALGMYLTYINLFIFILRFIIAIQSRD
>Mature_239_residues
PASSNFREVIRDAQSSALVGPNVVNKALPYVGGGMVLTAAGTLGGLSMIASPAFMPLFWVALIGNLVLFFVAQNIALKGN
NATALPLLAIYSLITGFTLSGLVAMAIGVAGIGSVGTAAIATGITFVIASIMGRRMSDSVGQALGGVVTLGIIGLVIAMV
VQLIGGIFAPQMFLGGGFELMIAGFGTVLFIGAAFLDFYTMPRVYQDEQYLAGALGMYLTYINLFIFILRFIIAIQSRD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24946; Mature: 24815

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASSNFREVIRDAQSSALVGPNVVNKALPYVGGGMVLTAAGTLGGLSMIASPAFMPLFW
CCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHEEECHHHHHHHHHHCHHHHHHHH
VALIGNLVLFFVAQNIALKGNNATALPLLAIYSLITGFTLSGLVAMAIGVAGIGSVGTAA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IATGITFVIASIMGRRMSDSVGQALGGVVTLGIIGLVIAMVVQLIGGIFAPQMFLGGGFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LMIAGFGTVLFIGAAFLDFYTMPRVYQDEQYLAGALGMYLTYINLFIFILRFIIAIQSRD
HHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PASSNFREVIRDAQSSALVGPNVVNKALPYVGGGMVLTAAGTLGGLSMIASPAFMPLFW
CCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHEEECHHHHHHHHHHCHHHHHHHH
VALIGNLVLFFVAQNIALKGNNATALPLLAIYSLITGFTLSGLVAMAIGVAGIGSVGTAA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IATGITFVIASIMGRRMSDSVGQALGGVVTLGIIGLVIAMVVQLIGGIFAPQMFLGGGFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LMIAGFGTVLFIGAAFLDFYTMPRVYQDEQYLAGALGMYLTYINLFIFILRFIIAIQSRD
HHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA