| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is ybeZ [C]
Identifier: 148242809
GI number: 148242809
Start: 1494897
End: 1495889
Strand: Direct
Name: ybeZ [C]
Synonym: SynRCC307_1710
Alternate gene names: 148242809
Gene position: 1494897-1495889 (Clockwise)
Preceding gene: 148242808
Following gene: 148242810
Centisome position: 67.19
GC content: 65.66
Gene sequence:
>993_bases GTGACCAGCAGCGAGGGCCGCGAACGCCAGCGCTTCACCATTGACCTTCCCGATCAGGAAGCCGCCCTGGCCCTCGCGGG TCAGGGCGAAATCATGTTGCGGCGGCTCAGTGATCTGACCGGCGCCAACCTCGTGCTGCGGGGACTGCAGCTGTTCATCG AAGGCCGCCCCAGCCAAATGGAGCGCGCTGCCGGCTTGGTGGAGCTGTTGCGCCCGTTTTGGAGTGAGGGCCAGGCCGTC ACCCAGGTGGACATCCAAACCAGCCTGCAGGCCCTCGATACCGGCCGCAGCGACGAACATCGCGACCTCAGCCAGCAGGT GCTGGCCCGCAGCCAGAACGGCAAGCTGCTGCGGCCGCGCACCCTGCGGCAAAAGCAATACGTCGAGGCGATGGAGCGCC ACGACCTCACCTTGGCGCTGGGCCCAGCGGGCACCGGCAAAACCTTTTTGGCTGTGGTGCAGGCGGTGCGCTGCCTGCAA GAGCGCAAGGTGGAGCGGATCATCCTGACCAGACCGGCGGTGGAGGCCGGTGAGCGTTTGGGCTTTCTGCCCGGTGATCT GCAGCAAAAGGTCGACCCCTATTTGCGGCCGCTTTACGACGCGCTGCACAGCCTGCTGAGCCCAGAACGCACAGCGGCCT TGATCGAGAAAAACATCATCGAAGTGGCGCCTTTGGCCTACATGCGCGGCCGCACCCTGGCCGAGGCGTTTGTGATCCTT GATGAGGCCCAAAACACCACCCCCGCGCAAATGCGCATGGTGTTGACGCGCTTGGGCGAAAACTCCCGCATGGTGGTCAC TGGCGACCCCAGCCAGGTGGATTTGCCCGGCAGCCAGCTCAGTGGCCTGGTGGAAGCCGCCCAGGTGCTCGATGGCGTTG AGGGCATTGCCATCTGCCGGCTCACGGCCGCTGATGTGGTGCGTCACCCCTTGGTGCAGCGCTTGGTGCAGGCCTACGCG CGCCGCGACGCGCAAAACCAAGGACGCCGGTGA
Upstream 100 bases:
>100_bases AGGCCGAAGCAGAAGCCAAAGCCAGCGAAGCTGCTGCTGCTGCTGCTGCTGCTGAGGAGGCTCCGGCTGAAGAGGCTCCC GCTGAGGCCTGAGCCTCACC
Downstream 100 bases:
>100_bases GGTGATCCGCACGCCTGCAGGCAGCGATCCCTTGGAATCACTGGCAGGATTGGTGGAGTTTGAAACTCTGATGCGCCATG CCGGCCAGCAGTAATTTCCG
Product: PhoH-like hosphate starvation-inducible protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTSSEGRERQRFTIDLPDQEAALALAGQGEIMLRRLSDLTGANLVLRGLQLFIEGRPSQMERAAGLVELLRPFWSEGQAV TQVDIQTSLQALDTGRSDEHRDLSQQVLARSQNGKLLRPRTLRQKQYVEAMERHDLTLALGPAGTGKTFLAVVQAVRCLQ ERKVERIILTRPAVEAGERLGFLPGDLQQKVDPYLRPLYDALHSLLSPERTAALIEKNIIEVAPLAYMRGRTLAEAFVIL DEAQNTTPAQMRMVLTRLGENSRMVVTGDPSQVDLPGSQLSGLVEAAQVLDGVEGIAICRLTAADVVRHPLVQRLVQAYA RRDAQNQGRR
Sequences:
>Translated_330_residues MTSSEGRERQRFTIDLPDQEAALALAGQGEIMLRRLSDLTGANLVLRGLQLFIEGRPSQMERAAGLVELLRPFWSEGQAV TQVDIQTSLQALDTGRSDEHRDLSQQVLARSQNGKLLRPRTLRQKQYVEAMERHDLTLALGPAGTGKTFLAVVQAVRCLQ ERKVERIILTRPAVEAGERLGFLPGDLQQKVDPYLRPLYDALHSLLSPERTAALIEKNIIEVAPLAYMRGRTLAEAFVIL DEAQNTTPAQMRMVLTRLGENSRMVVTGDPSQVDLPGSQLSGLVEAAQVLDGVEGIAICRLTAADVVRHPLVQRLVQAYA RRDAQNQGRR >Mature_329_residues TSSEGRERQRFTIDLPDQEAALALAGQGEIMLRRLSDLTGANLVLRGLQLFIEGRPSQMERAAGLVELLRPFWSEGQAVT QVDIQTSLQALDTGRSDEHRDLSQQVLARSQNGKLLRPRTLRQKQYVEAMERHDLTLALGPAGTGKTFLAVVQAVRCLQE RKVERIILTRPAVEAGERLGFLPGDLQQKVDPYLRPLYDALHSLLSPERTAALIEKNIIEVAPLAYMRGRTLAEAFVILD EAQNTTPAQMRMVLTRLGENSRMVVTGDPSQVDLPGSQLSGLVEAAQVLDGVEGIAICRLTAADVVRHPLVQRLVQAYAR RDAQNQGRR
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=332, Percent_Identity=44.8795180722892, Blast_Score=254, Evalue=6e-69, Organism=Escherichia coli, GI1787257, Length=203, Percent_Identity=46.3054187192118, Blast_Score=182, Evalue=4e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 36538; Mature: 36406
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSEGRERQRFTIDLPDQEAALALAGQGEIMLRRLSDLTGANLVLRGLQLFIEGRPSQM CCCCCCCCCCCEEEECCCCHHHEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHH ERAAGLVELLRPFWSEGQAVTQVDIQTSLQALDTGRSDEHRDLSQQVLARSQNGKLLRPR HHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEECCH TLRQKQYVEAMERHDLTLALGPAGTGKTFLAVVQAVRCLQERKVERIILTRPAVEAGERL HHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC GFLPGDLQQKVDPYLRPLYDALHSLLSPERTAALIEKNIIEVAPLAYMRGRTLAEAFVIL CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH DEAQNTTPAQMRMVLTRLGENSRMVVTGDPSQVDLPGSQLSGLVEAAQVLDGVEGIAICR HCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH LTAADVVRHPLVQRLVQAYARRDAQNQGRR HHHHHHHHHHHHHHHHHHHHHHCHHHCCCC >Mature Secondary Structure TSSEGRERQRFTIDLPDQEAALALAGQGEIMLRRLSDLTGANLVLRGLQLFIEGRPSQM CCCCCCCCCCEEEECCCCHHHEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHH ERAAGLVELLRPFWSEGQAVTQVDIQTSLQALDTGRSDEHRDLSQQVLARSQNGKLLRPR HHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEECCH TLRQKQYVEAMERHDLTLALGPAGTGKTFLAVVQAVRCLQERKVERIILTRPAVEAGERL HHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC GFLPGDLQQKVDPYLRPLYDALHSLLSPERTAALIEKNIIEVAPLAYMRGRTLAEAFVIL CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH DEAQNTTPAQMRMVLTRLGENSRMVVTGDPSQVDLPGSQLSGLVEAAQVLDGVEGIAICR HCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH LTAADVVRHPLVQRLVQAYARRDAQNQGRR HHHHHHHHHHHHHHHHHHHHHHCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]