Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242757

Identifier: 148242757

GI number: 148242757

Start: 1451404

End: 1451844

Strand: Direct

Name: 148242757

Synonym: SynRCC307_1658

Alternate gene names: NA

Gene position: 1451404-1451844 (Clockwise)

Preceding gene: 148242754

Following gene: 148242760

Centisome position: 65.23

GC content: 65.76

Gene sequence:

>441_bases
ATGGCGGAGCTTTTCAACGCCCTCCAACACGGCAGCGCGCCACTGGCTGCATCCCTGCTGCTCTCCGGTTTGGTGGTGAT
GCTGAGCCTGGTGCCGCTGGGGGCTGCCCGTTCGCAGGCGGATTTCAGCATGGCTGATCTGGCCGCCCCTAGGGCCATGT
TCGAGCGCCTGCCGGCCTGGGGACGCCGGGCCAGCTGGGCCCATCAAAACTGTTTTGAAGCCTTCACCCTGCATGCCCCC
GCTTGCCTGCTGGCCCTAGTGGCTGGGGTGTCAGCACCGATTGCCATGGCGGCTGCCTGGCTACACCCACTGCTGCGGCT
GCTCTACATCGGGGCCTATGTGGGCAATGTGCCGCCCCTGCGAGGACTCTGCTGGGCCTCGGCCCTGCTCTGCAGCGGCA
TCCTCTATCTCGAGGGCCTCAAAGCCGTGCTTCAGCAATGA

Upstream 100 bases:

>100_bases
TCGAAATCGCTGACAACATCAAAGCTGTAGGTGTCGGCCATGAAGGGCGGCAACGGCAGGGAATCCCATCAGCCTAGAAA
GGGGCCCCTTGTGAGGACCC

Downstream 100 bases:

>100_bases
GGCGGAGCCTCAATCAAAAAACAACAGCGTGACGACCTTGCCGAGATCTTCCGCGTCTTGGCAGGCCTGGATCAACGTTT
CGCTGTCGTGGAAGGCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MAELFNALQHGSAPLAASLLLSGLVVMLSLVPLGAARSQADFSMADLAAPRAMFERLPAWGRRASWAHQNCFEAFTLHAP
ACLLALVAGVSAPIAMAAAWLHPLLRLLYIGAYVGNVPPLRGLCWASALLCSGILYLEGLKAVLQQ

Sequences:

>Translated_146_residues
MAELFNALQHGSAPLAASLLLSGLVVMLSLVPLGAARSQADFSMADLAAPRAMFERLPAWGRRASWAHQNCFEAFTLHAP
ACLLALVAGVSAPIAMAAAWLHPLLRLLYIGAYVGNVPPLRGLCWASALLCSGILYLEGLKAVLQQ
>Mature_145_residues
AELFNALQHGSAPLAASLLLSGLVVMLSLVPLGAARSQADFSMADLAAPRAMFERLPAWGRRASWAHQNCFEAFTLHAPA
CLLALVAGVSAPIAMAAAWLHPLLRLLYIGAYVGNVPPLRGLCWASALLCSGILYLEGLKAVLQQ

Specific function: Unknown

COG id: COG3686

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15449; Mature: 15317

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELFNALQHGSAPLAASLLLSGLVVMLSLVPLGAARSQADFSMADLAAPRAMFERLPAW
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
GRRASWAHQNCFEAFTLHAPACLLALVAGVSAPIAMAAAWLHPLLRLLYIGAYVGNVPPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
RGLCWASALLCSGILYLEGLKAVLQQ
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AELFNALQHGSAPLAASLLLSGLVVMLSLVPLGAARSQADFSMADLAAPRAMFERLPAW
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
GRRASWAHQNCFEAFTLHAPACLLALVAGVSAPIAMAAAWLHPLLRLLYIGAYVGNVPPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
RGLCWASALLCSGILYLEGLKAVLQQ
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA