| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is futA [H]
Identifier: 148242732
GI number: 148242732
Start: 1430123
End: 1431190
Strand: Direct
Name: futA [H]
Synonym: SynRCC307_1633
Alternate gene names: 148242732
Gene position: 1430123-1431190 (Clockwise)
Preceding gene: 148242730
Following gene: 148242733
Centisome position: 64.28
GC content: 56.74
Gene sequence:
>1068_bases TTGCCAATAGTTCTCAAGATCGACTTGAAGCGCGTTCTGCCCATTTCAGTCCTGGCTCTCAGCGGACTGGCATCCTCAGG CTTGGTTCTGAGCCCCCCTCATCAGACCGCACACGCCCAAGAGAAGATCACCCTTGGTGTGTATTCGGCTCGCCACTACA ACACGGACAAAGAGCTCTATCGCGAGTTCGAAAGACAAAATCCCGGCATCACCATCAAGGTATTGGAAGCAAAAGACAAA GTGCTTCTCAAGCGCCTCGAGAGTGAAGGAGACAACAGCCCAGCCGATGTGTTGGTCTTGGTCGACGCCGCACGGCTGGT CAAAGCCTCGAAGCTGGGTCTGTTCCGCCCGAGCGTTTCACCAACGCTGCAACGATTGGTGCCTGCCAACCTGCGGGATC CTCAAGGCAAGTGGTACGCCCTCACGCGCCGTGCTCGCGTCCCCATCGTCAACCCTGACATCGTCGATCCGGCCAGCATC AAGAGCTATGCCGATTTGGCCAACCCTGCACTGAAGGGCAAGCTCTGCCTGCGCAACCGCAAGAGCCCCTACAACCAATC ATTGGTTGCTGACCAAATCATCCTGCGTGGTGAAGCGGCAACGGCGAAATGGATTCGCGGCATGGCCAACAACGTCAGCC AGGAATTCTTCCCAAAAGACACGCCTCAAGTGCAAGCCGTCGGCAAAGGCAAGTGCGGCGTCGCGGTCGTTAACACCTAC TACGTCGGCAGGATGCTGGCCGGCCGTAAAGGTGCGGACAACAAAGCCCTAGCCGAGAAGGTCAAAGTGGTGTTCCCCAA GCCCACCCACGTCAACGTGAGTGGCGCAGGCGTCACAGCATCCTCTGACAATCCACAGGCAGCCTTGAAACTCATTGAGT TTCTGGCGTCTCCCAATGCCGGCAAGAGCTATGCCGCAGCCAACCTGGAATACCCCGTCAAAGGCTTTGGCAACAATCCC ATCTTGCGGAGCTGGGGCACCTTCAAAGCTTATGGCGTCTCGGTTGAGCAACTTGGAGCCAAGAACAAGCAGGCCCAACA ACTGATGAAAGACAACGGCTGGAAGTAA
Upstream 100 bases:
>100_bases AGGCAAATCCGCCAACGGCTCATCTGATGCCCCAGGAAGTATCAAATGATCCAAAGGCGAAATTCATTTCATTCTTATCA GAAAACTGGCAGAAATTACG
Downstream 100 bases:
>100_bases GCCCGCAAGGCCCCGCAGTGACATCCCTCGCGGGGCCCGACCGATCACTTATTGCGACACTATTGAGAACCCCTTGCAAA AAGGCGCCGCCAGTGTGTAC
Product: ABC-type Fe3+ transport system, periplasmic component
Products: phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MPIVLKIDLKRVLPISVLALSGLASSGLVLSPPHQTAHAQEKITLGVYSARHYNTDKELYREFERQNPGITIKVLEAKDK VLLKRLESEGDNSPADVLVLVDAARLVKASKLGLFRPSVSPTLQRLVPANLRDPQGKWYALTRRARVPIVNPDIVDPASI KSYADLANPALKGKLCLRNRKSPYNQSLVADQIILRGEAATAKWIRGMANNVSQEFFPKDTPQVQAVGKGKCGVAVVNTY YVGRMLAGRKGADNKALAEKVKVVFPKPTHVNVSGAGVTASSDNPQAALKLIEFLASPNAGKSYAAANLEYPVKGFGNNP ILRSWGTFKAYGVSVEQLGAKNKQAQQLMKDNGWK
Sequences:
>Translated_355_residues MPIVLKIDLKRVLPISVLALSGLASSGLVLSPPHQTAHAQEKITLGVYSARHYNTDKELYREFERQNPGITIKVLEAKDK VLLKRLESEGDNSPADVLVLVDAARLVKASKLGLFRPSVSPTLQRLVPANLRDPQGKWYALTRRARVPIVNPDIVDPASI KSYADLANPALKGKLCLRNRKSPYNQSLVADQIILRGEAATAKWIRGMANNVSQEFFPKDTPQVQAVGKGKCGVAVVNTY YVGRMLAGRKGADNKALAEKVKVVFPKPTHVNVSGAGVTASSDNPQAALKLIEFLASPNAGKSYAAANLEYPVKGFGNNP ILRSWGTFKAYGVSVEQLGAKNKQAQQLMKDNGWK >Mature_354_residues PIVLKIDLKRVLPISVLALSGLASSGLVLSPPHQTAHAQEKITLGVYSARHYNTDKELYREFERQNPGITIKVLEAKDKV LLKRLESEGDNSPADVLVLVDAARLVKASKLGLFRPSVSPTLQRLVPANLRDPQGKWYALTRRARVPIVNPDIVDPASIK SYADLANPALKGKLCLRNRKSPYNQSLVADQIILRGEAATAKWIRGMANNVSQEFFPKDTPQVQAVGKGKCGVAVVNTYY VGRMLAGRKGADNKALAEKVKVVFPKPTHVNVSGAGVTASSDNPQAALKLIEFLASPNAGKSYAAANLEYPVKGFGNNPI LRSWGTFKAYGVSVEQLGAKNKQAQQLMKDNGWK
Specific function: May also be part of a periplasmic ABC transporter complex involved in iron import [H]
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Lumenal side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 460 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR006311 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 38568; Mature: 38437
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIVLKIDLKRVLPISVLALSGLASSGLVLSPPHQTAHAQEKITLGVYSARHYNTDKELY CCEEEEECCCHHCHHHHHHHHCCCCCCCEECCCCCHHHCCCEEEEEEEECCCCCCHHHHH REFERQNPGITIKVLEAKDKVLLKRLESEGDNSPADVLVLVDAARLVKASKLGLFRPSVS HHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCC PTLQRLVPANLRDPQGKWYALTRRARVPIVNPDIVDPASIKSYADLANPALKGKLCLRNR HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHCCHHHHCCC KSPYNQSLVADQIILRGEAATAKWIRGMANNVSQEFFPKDTPQVQAVGKGKCGVAVVNTY CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEHHH YVGRMLAGRKGADNKALAEKVKVVFPKPTHVNVSGAGVTASSDNPQAALKLIEFLASPNA HHHHHHCCCCCCCHHHHHHHHEEEECCCCEEEECCCCEECCCCCHHHHHHHHHHHHCCCC GKSYAAANLEYPVKGFGNNPILRSWGTFKAYGVSVEQLGAKNKQAQQLMKDNGWK CCCEEECCCCCCCCCCCCCCCEECCCCCEEECCCHHHHCCCCHHHHHHHHHCCCC >Mature Secondary Structure PIVLKIDLKRVLPISVLALSGLASSGLVLSPPHQTAHAQEKITLGVYSARHYNTDKELY CEEEEECCCHHCHHHHHHHHCCCCCCCEECCCCCHHHCCCEEEEEEEECCCCCCHHHHH REFERQNPGITIKVLEAKDKVLLKRLESEGDNSPADVLVLVDAARLVKASKLGLFRPSVS HHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCC PTLQRLVPANLRDPQGKWYALTRRARVPIVNPDIVDPASIKSYADLANPALKGKLCLRNR HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHCCHHHHCCC KSPYNQSLVADQIILRGEAATAKWIRGMANNVSQEFFPKDTPQVQAVGKGKCGVAVVNTY CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEHHH YVGRMLAGRKGADNKALAEKVKVVFPKPTHVNVSGAGVTASSDNPQAALKLIEFLASPNA HHHHHHCCCCCCCHHHHHHHHEEEECCCCEEEECCCCEECCCCCHHHHHHHHHHHHCCCC GKSYAAANLEYPVKGFGNNPILRSWGTFKAYGVSVEQLGAKNKQAQQLMKDNGWK CCCEEECCCCCCCCCCCCCCCEECCCCCEEECCCHHHHCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]
Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8828233; 10411274 [H]