| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is fur [C]
Identifier: 148242720
GI number: 148242720
Start: 1423026
End: 1423409
Strand: Direct
Name: fur [C]
Synonym: SynRCC307_1621
Alternate gene names: 148242720
Gene position: 1423026-1423409 (Clockwise)
Preceding gene: 148242719
Following gene: 148242721
Centisome position: 63.96
GC content: 60.42
Gene sequence:
>384_bases ATGGCGAAGGGGCTCAGCGACCGCCAGAGACAAATCCTCAGGATCCTTGAGGCGAGCAGCAAGGAGCTGAGCGGCCAAGA GCTGCACAAATTGGGCAGCGAACTGGGCCAGAGCATGGGCTTGGCCACCGTGTATCGCAACCTGCGGGTGCTGCAACAAG CAGGGCGAGTTCGCTGCCGTCACCTGCCCAGTGGCGAACTGCTTTACAGCCCACTGGAGCGTGATGTGCACCACCTCACT TGCCTGGAGTGCGGCACCAGCCAGCCACTAACGAGCTGTCCTGTTGAACAACAAGGGCTCAAGTTGCCCACACCCGAAGG GTTTGAGCCGCTCTTCCACACCCTGGAAGTCTTTGGCTACTGCGCCAAGTGCAAGCCCGAATGA
Upstream 100 bases:
>100_bases GGAAGCAAGGGAGAATTCGAGCAACGCCGCCTATTGGGAGGCCAAGCCCAGCTGGGCTGTTGATCACTCCTCTTAAGGTT GGCGCGTTCTAAGCCGTGTC
Downstream 100 bases:
>100_bases CTAGCAACAGCAGCGCTATTACGTTGGAAGCCAAAGCAGTCAGCCACTAAGGCGAACACGCAGGCAGCCAACGAGCCGAC CAATAACGAGAATGATTATC
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric Uptake Regulator Family Protein; Ferric Uptake Regulator Fur Family; FUR Family Transcriptional Regulator; Zinc Uptake Regulator; Ferric-Uptake Regulator; Fur Family Ferric Uptake Regulator; Metal Uptake Regulation Protein; Zinc Uptake Regulator Fur Family; Ferric Uptake Regulator Family; Ferric Uptake Regulator; Fur Family Transcriptional Regulator; Transcriptional Regulator Fur Family Protein; Transcriptional Regulator Fur Family; Metal Uptake Regulator; Ferric Uptake Regulator Furb; Transcriptional Regulator FUR Family; Zinc Uptake Regulation Protein Zur; Ferric Uptake Regulation Protein FurB; Leucine-Rich RepeatFerric Uptake Regulator Family Protein; Fe2+/Zn2+ Uptake Regulation Protein; Ferric Uptake Regulator FurB; Metal Uptake Regulator Ferric Uptake Regulator Protein; Fe(3+) Uptake Regulation Protein; Negative Regulator Of Ferric Iron Uptake
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MAKGLSDRQRQILRILEASSKELSGQELHKLGSELGQSMGLATVYRNLRVLQQAGRVRCRHLPSGELLYSPLERDVHHLT CLECGTSQPLTSCPVEQQGLKLPTPEGFEPLFHTLEVFGYCAKCKPE
Sequences:
>Translated_127_residues MAKGLSDRQRQILRILEASSKELSGQELHKLGSELGQSMGLATVYRNLRVLQQAGRVRCRHLPSGELLYSPLERDVHHLT CLECGTSQPLTSCPVEQQGLKLPTPEGFEPLFHTLEVFGYCAKCKPE >Mature_126_residues AKGLSDRQRQILRILEASSKELSGQELHKLGSELGQSMGLATVYRNLRVLQQAGRVRCRHLPSGELLYSPLERDVHHLTC LECGTSQPLTSCPVEQQGLKLPTPEGFEPLFHTLEVFGYCAKCKPE
Specific function: Acts As A Global Negative Controlling Element, Employing Fe(2+) As A Cofactor To Bind The Operator Of The Repressed Genes. Regulates The Expression Of Several Outer-Membrane Proteins Including The Iron Transport Operon. [C]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786899, Length=115, Percent_Identity=29.5652173913043, Blast_Score=62, Evalue=1e-11,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14173; Mature: 14041
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKGLSDRQRQILRILEASSKELSGQELHKLGSELGQSMGLATVYRNLRVLQQAGRVRCR CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLPSGELLYSPLERDVHHLTCLECGTSQPLTSCPVEQQGLKLPTPEGFEPLFHTLEVFGY CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH CAKCKPE HHCCCCC >Mature Secondary Structure AKGLSDRQRQILRILEASSKELSGQELHKLGSELGQSMGLATVYRNLRVLQQAGRVRCR CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLPSGELLYSPLERDVHHLTCLECGTSQPLTSCPVEQQGLKLPTPEGFEPLFHTLEVFGY CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH CAKCKPE HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA