Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242709

Identifier: 148242709

GI number: 148242709

Start: 1415505

End: 1415975

Strand: Direct

Name: 148242709

Synonym: SynRCC307_1610

Alternate gene names: NA

Gene position: 1415505-1415975 (Clockwise)

Preceding gene: 148242704

Following gene: 148242710

Centisome position: 63.62

GC content: 61.57

Gene sequence:

>471_bases
ATGCCCGAAGACCTGCTCAGCCGTGCCGGGATGGCCTACGCCCATGAACTGAGTTTCATGGTCTGTTTTGCAGCGCTGAC
CGCTGAACGCTTGATGATCCGCCCTGATCCCGATCAGGGAACAGCCACAAAGCTGATCATCACCGACATCATCTACGGCC
TCGCCGCGCTGACCCTGCTGGGCAGCGGCATCATGCGCGTCCTTTATTTCGGCCAGGGCAGCGAGTTCTACACCCAAAAC
CCGCTGTTCTGGTGGAAGGTTGGCCTCTACCTGGGCGCCGGTGCCCTGTCGCTGTACCCCACCATCACCTACATCCTGTG
GGCCATCCCGCTGCGCAAAGGCGAAGCCCCCAATGTCAGCGCTGGGGTGGCCAGCCGCATTGGCTGGGTGATCAACATTG
AACTTGTGGCCTTCGGCAGCCTGCCCTTCATGGCCAGCCTGATGGCACGTGGTGTTGGCCTGCCGGGATGA

Upstream 100 bases:

>100_bases
AAATCCTTTAGTTCTTCAATCCCTTCCTTCAGGGGAACCATGCATGAGCACTCCAGGGCGCGAGCGTTCGAGCTACTGTC
CCGGCGATTGCTGACCTGCC

Downstream 100 bases:

>100_bases
TTCCCTGTCCGCCAGTGGAGTGGCGGCAACCGGCTGAACCGCCTGCTGAGGTCACAACGAAACCCGCTCCAGCGAGTGCG
CCTGGCTACGCGAGCCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MPEDLLSRAGMAYAHELSFMVCFAALTAERLMIRPDPDQGTATKLIITDIIYGLAALTLLGSGIMRVLYFGQGSEFYTQN
PLFWWKVGLYLGAGALSLYPTITYILWAIPLRKGEAPNVSAGVASRIGWVINIELVAFGSLPFMASLMARGVGLPG

Sequences:

>Translated_156_residues
MPEDLLSRAGMAYAHELSFMVCFAALTAERLMIRPDPDQGTATKLIITDIIYGLAALTLLGSGIMRVLYFGQGSEFYTQN
PLFWWKVGLYLGAGALSLYPTITYILWAIPLRKGEAPNVSAGVASRIGWVINIELVAFGSLPFMASLMARGVGLPG
>Mature_155_residues
PEDLLSRAGMAYAHELSFMVCFAALTAERLMIRPDPDQGTATKLIITDIIYGLAALTLLGSGIMRVLYFGQGSEFYTQNP
LFWWKVGLYLGAGALSLYPTITYILWAIPLRKGEAPNVSAGVASRIGWVINIELVAFGSLPFMASLMARGVGLPG

Specific function: Unknown

COG id: COG3556

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16890; Mature: 16759

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEDLLSRAGMAYAHELSFMVCFAALTAERLMIRPDPDQGTATKLIITDIIYGLAALTLL
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
GSGIMRVLYFGQGSEFYTQNPLFWWKVGLYLGAGALSLYPTITYILWAIPLRKGEAPNVS
HHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
AGVASRIGWVINIELVAFGSLPFMASLMARGVGLPG
HHHHHHCCEEEEEEEEEECCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PEDLLSRAGMAYAHELSFMVCFAALTAERLMIRPDPDQGTATKLIITDIIYGLAALTLL
CHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
GSGIMRVLYFGQGSEFYTQNPLFWWKVGLYLGAGALSLYPTITYILWAIPLRKGEAPNVS
HHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
AGVASRIGWVINIELVAFGSLPFMASLMARGVGLPG
HHHHHHCCEEEEEEEEEECCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA