Click here to switch to the map view.

The map label for this gene is yfiH [C]

Identifier: 148242689

GI number: 148242689

Start: 1403908

End: 1404696

Strand: Direct

Name: yfiH [C]

Synonym: SynRCC307_1590

Alternate gene names: 148242689

Gene position: 1403908-1404696 (Clockwise)

Preceding gene: 148242688

Following gene: 148242691

Centisome position: 63.1

GC content: 65.15

Gene sequence:

>789_bases
ATGTCTGAACACGTCGAGCCGCCCTTCGACCGCCCCGACAAGGACTTCAACACCCTCGTTGGCTGGACATGGGTGGGCAC
CTACGGCGGTTACTACCTGCAGTGCGATCAGCTCAGCGCCTTTGAGCACGGCTTTTTTACGCGCCTATGGCATGGCCGTG
AACCGGGTGGCTTGGTGGGCTATGTGAGCTCCGGGGTGAGTGTGCACCGGCTCAAACAAGTGCATAGCGGCCGAGTGCTG
GCAGCCTCTGCAGCTCACAACGATCCCTGGCCAGAAGCCGATGGGCTGGTGAGTGATGCCGGCGGCCAAAGCCTGTGGGT
GGCTGGTGCTGACTGCACGCCGGTGCTGATCGCTGATCCAGAGAGCGGCAGCGTGGCGGCTTGCCATGCCGGCTGGCGCG
GCGTGGCGGCTGGCATCTTGACCACCGCCATCAGCCAGCTCGAGGCCAGCGGCTGCCGCCGTGAGCAGCTGCTGGTGGCC
CTAGGCCCGGCCGTGAGCGGCCCGAACTACCAAGTGGAGCGATCCACCAGCGAACAGCTCGGCCCCATCGACGATCTGCA
GGCTGCCGGCGCACTGCTGGATGACCCGCAAGAGGGCCGCGATCGCCTCGACATTCGCCGGGCGGCCCACTGGCAACTGC
TGCAATTCGGCTTGAGAACCGAGCAAATCTCGATTTGCCCGCTGTGCACGGTGGCTGAACCGGAGCTGTTTCACTCCTGG
CGGCGCGATCAGGTCAAGGCGGTGCAGTGGAGCGGCATCGTTAGCCAGAATGCCGATACGCCACGGTGA

Upstream 100 bases:

>100_bases
GCCGCACGGCAAGAGGCGGGCGGTTTGCAGTTCTTAGCTGTGCAGAGCGGGCCGGACGCCACAGAATTTGCTGGCTTTTG
GCTGCTGCGCGACCTTCCGG

Downstream 100 bases:

>100_bases
GGTTGTTGGCGGGCATGGCCCAGCGGCCGATGAACTGCAGCCCATGGCTGGCTGCCAAAGCCGACACCTGCTCGAGGGAG
CGCAATCCCCAACTTGGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSEHVEPPFDRPDKDFNTLVGWTWVGTYGGYYLQCDQLSAFEHGFFTRLWHGREPGGLVGYVSSGVSVHRLKQVHSGRVL
AASAAHNDPWPEADGLVSDAGGQSLWVAGADCTPVLIADPESGSVAACHAGWRGVAAGILTTAISQLEASGCRREQLLVA
LGPAVSGPNYQVERSTSEQLGPIDDLQAAGALLDDPQEGRDRLDIRRAAHWQLLQFGLRTEQISICPLCTVAEPELFHSW
RRDQVKAVQWSGIVSQNADTPR

Sequences:

>Translated_262_residues
MSEHVEPPFDRPDKDFNTLVGWTWVGTYGGYYLQCDQLSAFEHGFFTRLWHGREPGGLVGYVSSGVSVHRLKQVHSGRVL
AASAAHNDPWPEADGLVSDAGGQSLWVAGADCTPVLIADPESGSVAACHAGWRGVAAGILTTAISQLEASGCRREQLLVA
LGPAVSGPNYQVERSTSEQLGPIDDLQAAGALLDDPQEGRDRLDIRRAAHWQLLQFGLRTEQISICPLCTVAEPELFHSW
RRDQVKAVQWSGIVSQNADTPR
>Mature_261_residues
SEHVEPPFDRPDKDFNTLVGWTWVGTYGGYYLQCDQLSAFEHGFFTRLWHGREPGGLVGYVSSGVSVHRLKQVHSGRVLA
ASAAHNDPWPEADGLVSDAGGQSLWVAGADCTPVLIADPESGSVAACHAGWRGVAAGILTTAISQLEASGCRREQLLVAL
GPAVSGPNYQVERSTSEQLGPIDDLQAAGALLDDPQEGRDRLDIRRAAHWQLLQFGLRTEQISICPLCTVAEPELFHSWR
RDQVKAVQWSGIVSQNADTPR

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=192, Percent_Identity=28.6458333333333, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI190194372, Length=192, Percent_Identity=28.6458333333333, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI1788945, Length=186, Percent_Identity=34.4086021505376, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 28421; Mature: 28290

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHVEPPFDRPDKDFNTLVGWTWVGTYGGYYLQCDQLSAFEHGFFTRLWHGREPGGLVG
CCCCCCCCCCCCCCCHHHEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEE
YVSSGVSVHRLKQVHSGRVLAASAAHNDPWPEADGLVSDAGGQSLWVAGADCTPVLIADP
EECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEECCCCCEEEEECCCCCEEEEECC
ESGSVAACHAGWRGVAAGILTTAISQLEASGCRREQLLVALGPAVSGPNYQVERSTSEQL
CCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCEEEECCCHHHC
GPIDDLQAAGALLDDPQEGRDRLDIRRAAHWQLLQFGLRTEQISICPLCTVAEPELFHSW
CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHH
RRDQVKAVQWSGIVSQNADTPR
HHHHHEEEEECCEEECCCCCCC
>Mature Secondary Structure 
SEHVEPPFDRPDKDFNTLVGWTWVGTYGGYYLQCDQLSAFEHGFFTRLWHGREPGGLVG
CCCCCCCCCCCCCCHHHEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEE
YVSSGVSVHRLKQVHSGRVLAASAAHNDPWPEADGLVSDAGGQSLWVAGADCTPVLIADP
EECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEECCCCCEEEEECCCCCEEEEECC
ESGSVAACHAGWRGVAAGILTTAISQLEASGCRREQLLVALGPAVSGPNYQVERSTSEQL
CCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCEEEECCCHHHC
GPIDDLQAAGALLDDPQEGRDRLDIRRAAHWQLLQFGLRTEQISICPLCTVAEPELFHSW
CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHH
RRDQVKAVQWSGIVSQNADTPR
HHHHHEEEEECCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]