Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242646

Identifier: 148242646

GI number: 148242646

Start: 1364537

End: 1364803

Strand: Direct

Name: 148242646

Synonym: SynRCC307_1547

Alternate gene names: NA

Gene position: 1364537-1364803 (Clockwise)

Preceding gene: 148242644

Following gene: 148242652

Centisome position: 61.33

GC content: 58.05

Gene sequence:

>267_bases
ATGACTGCGTTACAGGACCCTGACGCAATCCGCCACTTTCAAAGCCTGATCGACGCCTGTCAAGAACTGACCTTGCGACA
CCACAGCCCCTCGGAACTGAGGCTGTATGCCGATGGATTCATCCATGCGCTGCGCCGCAGCCAACAACTGGATCCCCTGA
GCCAGCGGCGATTCGAAGAATTCATTGATCGCTGGCTGATGGATCCATCCAGCTTCTTTGGCCCGGACGGGGATCCGCGC
ACCCTGTTTGAAACCGAGCGCCGCTAA

Upstream 100 bases:

>100_bases
ACGCCTCAGAGGCAGACACACATTTAGACCTGTTACCTCTACCGTAAGCGGGTTTCTTCGGCATGCTGGTAACAGGCGAT
GCCTTACCAGCTGTCCCCCC

Downstream 100 bases:

>100_bases
ATCTCAGCCAAAGCAATAGTGCTTTTTCACGGCTTGGTGCACCTGCCAGGTGCAGCGCAAGCCAGCGCTGAACTCCACAA
AATCCCCTGCACCAAAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MTALQDPDAIRHFQSLIDACQELTLRHHSPSELRLYADGFIHALRRSQQLDPLSQRRFEEFIDRWLMDPSSFFGPDGDPR
TLFETERR

Sequences:

>Translated_88_residues
MTALQDPDAIRHFQSLIDACQELTLRHHSPSELRLYADGFIHALRRSQQLDPLSQRRFEEFIDRWLMDPSSFFGPDGDPR
TLFETERR
>Mature_87_residues
TALQDPDAIRHFQSLIDACQELTLRHHSPSELRLYADGFIHALRRSQQLDPLSQRRFEEFIDRWLMDPSSFFGPDGDPRT
LFETERR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10430; Mature: 10299

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALQDPDAIRHFQSLIDACQELTLRHHSPSELRLYADGFIHALRRSQQLDPLSQRRFEE
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FIDRWLMDPSSFFGPDGDPRTLFETERR
HHHHHHCCCHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TALQDPDAIRHFQSLIDACQELTLRHHSPSELRLYADGFIHALRRSQQLDPLSQRRFEE
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FIDRWLMDPSSFFGPDGDPRTLFETERR
HHHHHHCCCHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA