| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242571
Identifier: 148242571
GI number: 148242571
Start: 1309581
End: 1309925
Strand: Direct
Name: 148242571
Synonym: SynRCC307_1472
Alternate gene names: NA
Gene position: 1309581-1309925 (Clockwise)
Preceding gene: 148242570
Following gene: 148242585
Centisome position: 58.86
GC content: 65.51
Gene sequence:
>345_bases ATGAGCATGGCCGTTGAACTGCGCCAGGCCGGAAGTGAGCAGGTGCTGCACCGTTTGATGCTGGAAGACGTGCCTCAGCC GGGCCGCTGGCTGGAGGTGGAGGGCCTGAGCTACCTGGTGCTGCAACGGCGACATCGCTACCGCCTCAGGGGCGGCCGCT ACCAACTCAGCGGGGTCGCCTTGATGGTGAAAGCCCAAAAGCAACCCGCCGATTCCCGCTGGTGGAACGATCGCTGGGTG ATTGGCGATCCCAGCTGCCGCTTCAATGCCCGCAGCCCCCTGTTGCGTTGCGCCGTGCTGCCAGAAGGCCCCTGCGAGCG CTGCAGCCACTACAGCCTCAGCTGA
Upstream 100 bases:
>100_bases CCGATCTCGAGTTGCCGGAATGGGGCTTACTGGTGCTAGTGGGTCTGCTCTTTTTGTGGGGATTTTCAGCCCAACATCCG GAGGCCGAAGAGGTTCAGCC
Downstream 100 bases:
>100_bases GCTGCTGAATCAACGAATCTCCGCTGCTGGCTGCTTTGCCTTCCAGTTGCGCCTGCCGCAGCAGGATCGGACAGCCACTG GTGGCCAGGACCAGGCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSMAVELRQAGSEQVLHRLMLEDVPQPGRWLEVEGLSYLVLQRRHRYRLRGGRYQLSGVALMVKAQKQPADSRWWNDRWV IGDPSCRFNARSPLLRCAVLPEGPCERCSHYSLS
Sequences:
>Translated_114_residues MSMAVELRQAGSEQVLHRLMLEDVPQPGRWLEVEGLSYLVLQRRHRYRLRGGRYQLSGVALMVKAQKQPADSRWWNDRWV IGDPSCRFNARSPLLRCAVLPEGPCERCSHYSLS >Mature_113_residues SMAVELRQAGSEQVLHRLMLEDVPQPGRWLEVEGLSYLVLQRRHRYRLRGGRYQLSGVALMVKAQKQPADSRWWNDRWVI GDPSCRFNARSPLLRCAVLPEGPCERCSHYSLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13207; Mature: 13076
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMAVELRQAGSEQVLHRLMLEDVPQPGRWLEVEGLSYLVLQRRHRYRLRGGRYQLSGVA CCCCHHHHHCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEECCEE LMVKAQKQPADSRWWNDRWVIGDPSCRFNARSPLLRCAVLPEGPCERCSHYSLS EEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCHHHCCCCCCC >Mature Secondary Structure SMAVELRQAGSEQVLHRLMLEDVPQPGRWLEVEGLSYLVLQRRHRYRLRGGRYQLSGVA CCCHHHHHCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEECCEE LMVKAQKQPADSRWWNDRWVIGDPSCRFNARSPLLRCAVLPEGPCERCSHYSLS EEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA