| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242568
Identifier: 148242568
GI number: 148242568
Start: 1307625
End: 1308002
Strand: Direct
Name: 148242568
Synonym: SynRCC307_1469
Alternate gene names: NA
Gene position: 1307625-1308002 (Clockwise)
Preceding gene: 148242567
Following gene: 148242570
Centisome position: 58.77
GC content: 57.67
Gene sequence:
>378_bases ATGAGCAAGGCGATGAATCGAGCGGCACAAATCGCCCTTGCCTGCGGCCTGATCGTGGCTGCCATCGCCGGTTTCAAGGG CTGCCAGCAGACAACAAGGCTGAATCGTCCGGTGGCCACTGAAGGAATTCCAGAGGGTCACGACTACCTGATGCGCACCG AAACGGGCAGCGACTTTTACACCAAGCTCAAAAGCACCAACTACGCAGTGCGCGAGATCTCAGCGCATCGCATTGATGCC ACAGGCAGAGCCTCCAGCGATTTGAACTTCAATCTGGATTGCTACGGCAATCAAGTGGCCATCGGTCAATTGGGCAGTGG CTGGGTGCCCATCCAGCCCGGCAGCGTTGGTGAAGCCATGGCCAAGCGCTATTGCTGA
Upstream 100 bases:
>100_bases ATCAGATTGGGGTGCCGTTTGCTTAGCGGCAGGGACAGCAGTCCGCCCAGCAAGCGACTGGCATAGCGTTGGCTCCATCG CAAAAAGAAAGCGAGGGCGG
Downstream 100 bases:
>100_bases GGATCAGCCCACCTGAATCAATTGCTCCTCAAGGAGCTGGTTGAAATGCAGAAGTTGCTCATCGCTGAGCTGCTGACGGC TGGCTTTCCCAAACTGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MSKAMNRAAQIALACGLIVAAIAGFKGCQQTTRLNRPVATEGIPEGHDYLMRTETGSDFYTKLKSTNYAVREISAHRIDA TGRASSDLNFNLDCYGNQVAIGQLGSGWVPIQPGSVGEAMAKRYC
Sequences:
>Translated_125_residues MSKAMNRAAQIALACGLIVAAIAGFKGCQQTTRLNRPVATEGIPEGHDYLMRTETGSDFYTKLKSTNYAVREISAHRIDA TGRASSDLNFNLDCYGNQVAIGQLGSGWVPIQPGSVGEAMAKRYC >Mature_124_residues SKAMNRAAQIALACGLIVAAIAGFKGCQQTTRLNRPVATEGIPEGHDYLMRTETGSDFYTKLKSTNYAVREISAHRIDAT GRASSDLNFNLDCYGNQVAIGQLGSGWVPIQPGSVGEAMAKRYC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13416; Mature: 13285
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAMNRAAQIALACGLIVAAIAGFKGCQQTTRLNRPVATEGIPEGHDYLMRTETGSDFY CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHH TKLKSTNYAVREISAHRIDATGRASSDLNFNLDCYGNQVAIGQLGSGWVPIQPGSVGEAM HHHCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEECCCCCEEEECCCCHHHHH AKRYC HHCCC >Mature Secondary Structure SKAMNRAAQIALACGLIVAAIAGFKGCQQTTRLNRPVATEGIPEGHDYLMRTETGSDFY CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHH TKLKSTNYAVREISAHRIDATGRASSDLNFNLDCYGNQVAIGQLGSGWVPIQPGSVGEAM HHHCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEECCCCCEEEECCCCHHHHH AKRYC HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA