The gene/protein map for NC_009482 is currently unavailable.
Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

Click here to switch to the map view.

The map label for this gene is 148242523

Identifier: 148242523

GI number: 148242523

Start: 1262878

End: 1263684

Strand: Direct

Name: 148242523

Synonym: SynRCC307_1424

Alternate gene names: NA

Gene position: 1262878-1263684 (Clockwise)

Preceding gene: 148242521

Following gene: 148242529

Centisome position: 56.76

GC content: 57.99

Gene sequence:

>807_bases
ATGCCGTTGGTTATGCCCCGCTGGTTGCTGTCTGCCATCTGCGCATTGCTGTTGTGCCTCTGGCAGCCATCGGCAGCCCT
CGCCATCGACGACCCTTCGGTCTTACCGGATCAACCCACCCCTGTGATTGATCTGGCCAGGATCCTCACCGACAGCCAGC
GCAAAAACCTGGAGCAAGAACTCGATGGCGTTGAAGCCAAGGTGGGCTGGAAATTGCGCGTACTCACCCAGTTCGATCAA
ACACCAGGACTGGCCGTGCGCGATTTCTGGCAGCTGGATGAGCGCAGCCTGCTGTTGATTGCCGACCCCCGCGGCGGCAA
CCTGTTGAACTTCAACGTGGGCGACGCTCTCTTTGCGCTGATGCCGCGCACCTACTGGGTGGAACTACAAACCCGCTTTG
GCAATCAGTTTTATGTGCGCGACCACGGCGAAGACGGCGCCATTTTTGATGCCCTCGAAGCCGTTGAAATTTGCTTGGAG
CGTGGTGGGTGCCAAGTGGTGCCTGGTTTGCCCCAAGAGCAGTGGATTCTCACCTTGATGACATCCATCTTGGGGGGATT
GATCGTGGGAATTGCTGCATTCCCACGGGAACCGGATCAAACCATCGCCTGGTCTTGGGTGCTGCTGCTTTCACCGCTTT
GGGTGATTCTCTTTGGCGTCTTTGGCATCGGCCCGGTGGTGACCCGCACGGCTGATTGGTTGCCACTGAGCCGCAATATT
CTCGGCTTCATTGGGAGCAGCGTTGCCGCTTATCTCTTGGCTCAATATCTCACCAGCCGCAACAGCCAAGCAGGCGACAA
CCCCTAG

Upstream 100 bases:

>100_bases
GCGGCCCAGCGCTGGCCTGAAGGCGCTGCACCAGCCAGGAGCTCTGCTGCTGTTCCACCACAACACCTCCGCTGGACATC
AACGAGAATGCACCACCTCA

Downstream 100 bases:

>100_bases
ATCAAAGGCCCTCGCTCACCTTGGCGAGCATGCACTCGAGACTGTCGTCGTTGCAGGGCTCAGGGGCCACCTCAACCTGT
TGGGGCTCTTCCATCAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MPLVMPRWLLSAICALLLCLWQPSAALAIDDPSVLPDQPTPVIDLARILTDSQRKNLEQELDGVEAKVGWKLRVLTQFDQ
TPGLAVRDFWQLDERSLLLIADPRGGNLLNFNVGDALFALMPRTYWVELQTRFGNQFYVRDHGEDGAIFDALEAVEICLE
RGGCQVVPGLPQEQWILTLMTSILGGLIVGIAAFPREPDQTIAWSWVLLLSPLWVILFGVFGIGPVVTRTADWLPLSRNI
LGFIGSSVAAYLLAQYLTSRNSQAGDNP

Sequences:

>Translated_268_residues
MPLVMPRWLLSAICALLLCLWQPSAALAIDDPSVLPDQPTPVIDLARILTDSQRKNLEQELDGVEAKVGWKLRVLTQFDQ
TPGLAVRDFWQLDERSLLLIADPRGGNLLNFNVGDALFALMPRTYWVELQTRFGNQFYVRDHGEDGAIFDALEAVEICLE
RGGCQVVPGLPQEQWILTLMTSILGGLIVGIAAFPREPDQTIAWSWVLLLSPLWVILFGVFGIGPVVTRTADWLPLSRNI
LGFIGSSVAAYLLAQYLTSRNSQAGDNP
>Mature_267_residues
PLVMPRWLLSAICALLLCLWQPSAALAIDDPSVLPDQPTPVIDLARILTDSQRKNLEQELDGVEAKVGWKLRVLTQFDQT
PGLAVRDFWQLDERSLLLIADPRGGNLLNFNVGDALFALMPRTYWVELQTRFGNQFYVRDHGEDGAIFDALEAVEICLER
GGCQVVPGLPQEQWILTLMTSILGGLIVGIAAFPREPDQTIAWSWVLLLSPLWVILFGVFGIGPVVTRTADWLPLSRNIL
GFIGSSVAAYLLAQYLTSRNSQAGDNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29680; Mature: 29549

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLVMPRWLLSAICALLLCLWQPSAALAIDDPSVLPDQPTPVIDLARILTDSQRKNLEQE
CCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCHHHHHHHHH
LDGVEAKVGWKLRVLTQFDQTPGLAVRDFWQLDERSLLLIADPRGGNLLNFNVGDALFAL
HCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCEEEEECCCCCCEEEECHHHHHHHH
MPRTYWVELQTRFGNQFYVRDHGEDGAIFDALEAVEICLERGGCQVVPGLPQEQWILTLM
CCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH
TSILGGLIVGIAAFPREPDQTIAWSWVLLLSPLWVILFGVFGIGPVVTRTADWLPLSRNI
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHH
LGFIGSSVAAYLLAQYLTSRNSQAGDNP
HHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PLVMPRWLLSAICALLLCLWQPSAALAIDDPSVLPDQPTPVIDLARILTDSQRKNLEQE
CCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCHHHHHHHHH
LDGVEAKVGWKLRVLTQFDQTPGLAVRDFWQLDERSLLLIADPRGGNLLNFNVGDALFAL
HCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCEEEEECCCCCCEEEECHHHHHHHH
MPRTYWVELQTRFGNQFYVRDHGEDGAIFDALEAVEICLERGGCQVVPGLPQEQWILTLM
CCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH
TSILGGLIVGIAAFPREPDQTIAWSWVLLLSPLWVILFGVFGIGPVVTRTADWLPLSRNI
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHH
LGFIGSSVAAYLLAQYLTSRNSQAGDNP
HHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA