Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is yfaO [C]

Identifier: 148242500

GI number: 148242500

Start: 1246899

End: 1247324

Strand: Direct

Name: yfaO [C]

Synonym: SynRCC307_1401

Alternate gene names: 148242500

Gene position: 1246899-1247324 (Clockwise)

Preceding gene: 148242499

Following gene: 148242501

Centisome position: 56.04

GC content: 62.21

Gene sequence:

>426_bases
GTGAGCGAAGTGGCCATCGCGATGATCGAATGCGACGGCCGCTGGCTGCTGCAGCTGCGTGACGACACCGAGGGGATTCT
CTATCCCGGCCAGTGGGCCCTCTTTGGAGGACATCTCGATCCCGGGGAGACCCCTGAGGTGGCCTTGCGGCGCGAACTGG
AAGAAGAGATCAATTGGGCTGGCAGCGATCTGGCCCCTTGGTTTGAACAGCGCGATGACCAGCGCATCCGCCATTTTTTT
CGAGGCCCTCTGGCCGTTCCGCTGGAGTCCCTCACGCTGCTGGAGGGGCAAGACATGGTGGTCGCCGCACTCGATGAGTT
GCTCAGCGGCTCGATCTGGAGCCCGAAGTGCCAACAGCGGCGCCCGCTAGCCCCTTCGCTGCAACGGGCTGTACAAGAGC
TGAAAAAAGAACGCGATCAAGCCTGA

Upstream 100 bases:

>100_bases
TGGGCACGGTGTTGCTCTCCGGCTCGATCGGTCTGTTCTTTGGCGTTGTTCCAGCGCGCCGCGCCGCCCAACTCGATCCG
ATCGTGGCCCTCAGACGCTT

Downstream 100 bases:

>100_bases
GAAGACTTTACAATCGCGAAACATTTTTGGTGGCACGGGGCGCTTCCTATGAACAACCGCTGGCGACTGATTGCGCTTTG
GGCCCTGCCCATCGCCCTGG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NUDIX Family Protein; Nudix Family Protein; Mutator MutT Protein; Hydrolase NUDIX Family

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSEVAIAMIECDGRWLLQLRDDTEGILYPGQWALFGGHLDPGETPEVALRRELEEEINWAGSDLAPWFEQRDDQRIRHFF
RGPLAVPLESLTLLEGQDMVVAALDELLSGSIWSPKCQQRRPLAPSLQRAVQELKKERDQA

Sequences:

>Translated_141_residues
MSEVAIAMIECDGRWLLQLRDDTEGILYPGQWALFGGHLDPGETPEVALRRELEEEINWAGSDLAPWFEQRDDQRIRHFF
RGPLAVPLESLTLLEGQDMVVAALDELLSGSIWSPKCQQRRPLAPSLQRAVQELKKERDQA
>Mature_140_residues
SEVAIAMIECDGRWLLQLRDDTEGILYPGQWALFGGHLDPGETPEVALRRELEEEINWAGSDLAPWFEQRDDQRIRHFFR
GPLAVPLESLTLLEGQDMVVAALDELLSGSIWSPKCQQRRPLAPSLQRAVQELKKERDQA

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.-.- [C]

Molecular weight: Translated: 16064; Mature: 15933

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVAIAMIECDGRWLLQLRDDTEGILYPGQWALFGGHLDPGETPEVALRRELEEEINWA
CCCEEEEEEEECCEEEEEEECCCCCEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHCCC
GSDLAPWFEQRDDQRIRHFFRGPLAVPLESLTLLEGQDMVVAALDELLSGSIWSPKCQQR
CCCCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCC
RPLAPSLQRAVQELKKERDQA
CCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEVAIAMIECDGRWLLQLRDDTEGILYPGQWALFGGHLDPGETPEVALRRELEEEINWA
CCEEEEEEEECCEEEEEEECCCCCEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHCCC
GSDLAPWFEQRDDQRIRHFFRGPLAVPLESLTLLEGQDMVVAALDELLSGSIWSPKCQQR
CCCCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCC
RPLAPSLQRAVQELKKERDQA
CCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA