| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is yfaO [C]
Identifier: 148242500
GI number: 148242500
Start: 1246899
End: 1247324
Strand: Direct
Name: yfaO [C]
Synonym: SynRCC307_1401
Alternate gene names: 148242500
Gene position: 1246899-1247324 (Clockwise)
Preceding gene: 148242499
Following gene: 148242501
Centisome position: 56.04
GC content: 62.21
Gene sequence:
>426_bases GTGAGCGAAGTGGCCATCGCGATGATCGAATGCGACGGCCGCTGGCTGCTGCAGCTGCGTGACGACACCGAGGGGATTCT CTATCCCGGCCAGTGGGCCCTCTTTGGAGGACATCTCGATCCCGGGGAGACCCCTGAGGTGGCCTTGCGGCGCGAACTGG AAGAAGAGATCAATTGGGCTGGCAGCGATCTGGCCCCTTGGTTTGAACAGCGCGATGACCAGCGCATCCGCCATTTTTTT CGAGGCCCTCTGGCCGTTCCGCTGGAGTCCCTCACGCTGCTGGAGGGGCAAGACATGGTGGTCGCCGCACTCGATGAGTT GCTCAGCGGCTCGATCTGGAGCCCGAAGTGCCAACAGCGGCGCCCGCTAGCCCCTTCGCTGCAACGGGCTGTACAAGAGC TGAAAAAAGAACGCGATCAAGCCTGA
Upstream 100 bases:
>100_bases TGGGCACGGTGTTGCTCTCCGGCTCGATCGGTCTGTTCTTTGGCGTTGTTCCAGCGCGCCGCGCCGCCCAACTCGATCCG ATCGTGGCCCTCAGACGCTT
Downstream 100 bases:
>100_bases GAAGACTTTACAATCGCGAAACATTTTTGGTGGCACGGGGCGCTTCCTATGAACAACCGCTGGCGACTGATTGCGCTTTG GGCCCTGCCCATCGCCCTGG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NUDIX Family Protein; Nudix Family Protein; Mutator MutT Protein; Hydrolase NUDIX Family
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSEVAIAMIECDGRWLLQLRDDTEGILYPGQWALFGGHLDPGETPEVALRRELEEEINWAGSDLAPWFEQRDDQRIRHFF RGPLAVPLESLTLLEGQDMVVAALDELLSGSIWSPKCQQRRPLAPSLQRAVQELKKERDQA
Sequences:
>Translated_141_residues MSEVAIAMIECDGRWLLQLRDDTEGILYPGQWALFGGHLDPGETPEVALRRELEEEINWAGSDLAPWFEQRDDQRIRHFF RGPLAVPLESLTLLEGQDMVVAALDELLSGSIWSPKCQQRRPLAPSLQRAVQELKKERDQA >Mature_140_residues SEVAIAMIECDGRWLLQLRDDTEGILYPGQWALFGGHLDPGETPEVALRRELEEEINWAGSDLAPWFEQRDDQRIRHFFR GPLAVPLESLTLLEGQDMVVAALDELLSGSIWSPKCQQRRPLAPSLQRAVQELKKERDQA
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.-.- [C]
Molecular weight: Translated: 16064; Mature: 15933
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVAIAMIECDGRWLLQLRDDTEGILYPGQWALFGGHLDPGETPEVALRRELEEEINWA CCCEEEEEEEECCEEEEEEECCCCCEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHCCC GSDLAPWFEQRDDQRIRHFFRGPLAVPLESLTLLEGQDMVVAALDELLSGSIWSPKCQQR CCCCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCC RPLAPSLQRAVQELKKERDQA CCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEVAIAMIECDGRWLLQLRDDTEGILYPGQWALFGGHLDPGETPEVALRRELEEEINWA CCEEEEEEEECCEEEEEEECCCCCEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHCCC GSDLAPWFEQRDDQRIRHFFRGPLAVPLESLTLLEGQDMVVAALDELLSGSIWSPKCQQR CCCCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCC RPLAPSLQRAVQELKKERDQA CCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA