| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is treS [H]
Identifier: 148242479
GI number: 148242479
Start: 1227980
End: 1229710
Strand: Direct
Name: treS [H]
Synonym: SynRCC307_1380
Alternate gene names: 148242479
Gene position: 1227980-1229710 (Clockwise)
Preceding gene: 148242478
Following gene: 148242482
Centisome position: 55.19
GC content: 61.35
Gene sequence:
>1731_bases ATGCCTACCAACTCCGCAGCTGAACTCGCCTCCCCCTGGTGGGAGGGGTCAGTGATCTACGAACTGATCCCCCGCTGCTT CGCTGATGGCAATGGCGACGGCATTGGAGACCTCGACGGGCTGAAACAACGGCTGGACTATCTCCACTGGCTTGGCGTGG ATGCGGTCTGGATGACCCCCATCTGTGATTCACCGCTGCGCGACGGCGGCTACGACATCACCGATTACAAGTCGGTCCAT CCCGACCTCGGTGATCTACAGGCTCTCGACTCCCTGATTCGGCATGCCCATGCACTGGGCTTGAAGGTGCTCTTCGATCT GGTGCTGAACCACACCAGTGACATGCATCTGTGGTTCCAGCGTGCGCGTTGGGCTGAGCGCGGCTCCCCCGAGCGCAACT TCTACGTCTGGCGCGACGACGACAAGAGTTACAGCGATGCGCCTGTTCTATTCCGCCATTTCGAAGACTCGAATTGGCAC TGGGATCCGGTGGCCGGCCAGTACTACCTGCATCGGTTCCTGCGGCACCAGCCCGATCTCAACTACGACAACCCCCAGGT TCAAGAGGCGATGCTCGATGTGCTCGATTTTTGGATTGATCGAGGCATTGATGGTTTTCGGCTTGATGCCATCCCCTTCC TCTTTGAACGGGAGGGCACGCGCTGCGAGGGGCTGCCTGAAACCCATGCGTTCCTGCGCCGGCTGCGCAGCAGGGCCAAA GAACGCTGCGAGCAATTGGGCCGTGAGGAGGTGCTGCTGCTGGCTGAGGCCATCCAACCTGTGCATGAAGCGATGCCATA CGTCGCTGACGACGAACTGCACTCAGCCTTCAATTTCGCTCTAACGGCCCACCTCTTCGCCGCGGTGGCGCACGGGGAGG TGAGTGCTCTGCAGAACTTCCTGTTGGAGTTTCGCCAATTGAACGCCGGTTGCCGCTGGGCTCTGCCGCTACGCAATCAC GATGAGCTCTGGCTCGGCGATGGCCACCTGGTGCCCGAGGCGATCGTTGACCGCGTCCGCGAGGGCTTCCCCAATGCCAA AGGCCATTGGCTGAACTGGGGCATCAACCGCCGGCTCTCACCATTACTCAACGGCGATCCGCGCCCGAACAAGGCTCTGC ACGCTCTGCTTTACAGCCTGCCGGGCATGCCCTGCATCTACTACGGCGATGAACTGGGCATGGGGGACTATCCCGGCCTC AGGGACCGGGACGCCAATCGCACGCCGATGGCCTGGACATCAGAGCGCAACGGTGGCTTCTCCAAGGCACCCGACCCTCT GCTGGTGCTCCCCCCCATCACCCGGCCTGGGTACAACTGCCAAATGATGAATGTGGCCGTGCAGAAAAGCCTGCAGGGCT CACTGTTGAACTGGCACCGCAACACCTTGCTCAGCCGCCGCTTGCTCCCTGCCCTCCGGTATGGCGACTTCCAATTACTG GAGAACTCCCACCCAGGAGTGATCAGCTACATCCGCCAATCCGAGGAGATGACCATCCTGGTGGCGGTCAATCTCAGCGG CAATCCCGCCTCGACGCGGCTGGATTTGGGCGCTTGGCAAGGACAGCAGGTGCGCGAGGTGCTCGGTGGCTGCCCCTTCC CTGTCGCCAGTGAGCATTGGTTTGCCTACCTCTCGGCCTACGACTACTGCTGGTGGTTGATCGGTGATGTGGAGCCTGAA TCCACCAGCAGCTCCGACGCCATCGCCGACAGCCTGGCGGTTTCTTGCTGA
Upstream 100 bases:
>100_bases CGAGCAACTCGCCACCGAACTAGGGGCCTAACCAACTACTGACAAGCAAGGCAAGGCGGGTCTATTCCAGATACAGACCC TCGTCGAGGGTGCCCGCTTC
Downstream 100 bases:
>100_bases TCCAATAACGCCAAGCGGCTGCGCCGGCTCAGCAGATCACTGGAGGTGGTTGCCCACTCCTGAGCGATGTTGAAGCGCCA CTCAGCGCGGCAAATGGGCA
Product: trehalose synthase
Products: NA
Alternate protein names: Maltose alpha-D-glucosyltransferase [H]
Number of amino acids: Translated: 576; Mature: 575
Protein sequence:
>576_residues MPTNSAAELASPWWEGSVIYELIPRCFADGNGDGIGDLDGLKQRLDYLHWLGVDAVWMTPICDSPLRDGGYDITDYKSVH PDLGDLQALDSLIRHAHALGLKVLFDLVLNHTSDMHLWFQRARWAERGSPERNFYVWRDDDKSYSDAPVLFRHFEDSNWH WDPVAGQYYLHRFLRHQPDLNYDNPQVQEAMLDVLDFWIDRGIDGFRLDAIPFLFEREGTRCEGLPETHAFLRRLRSRAK ERCEQLGREEVLLLAEAIQPVHEAMPYVADDELHSAFNFALTAHLFAAVAHGEVSALQNFLLEFRQLNAGCRWALPLRNH DELWLGDGHLVPEAIVDRVREGFPNAKGHWLNWGINRRLSPLLNGDPRPNKALHALLYSLPGMPCIYYGDELGMGDYPGL RDRDANRTPMAWTSERNGGFSKAPDPLLVLPPITRPGYNCQMMNVAVQKSLQGSLLNWHRNTLLSRRLLPALRYGDFQLL ENSHPGVISYIRQSEEMTILVAVNLSGNPASTRLDLGAWQGQQVREVLGGCPFPVASEHWFAYLSAYDYCWWLIGDVEPE STSSSDAIADSLAVSC
Sequences:
>Translated_576_residues MPTNSAAELASPWWEGSVIYELIPRCFADGNGDGIGDLDGLKQRLDYLHWLGVDAVWMTPICDSPLRDGGYDITDYKSVH PDLGDLQALDSLIRHAHALGLKVLFDLVLNHTSDMHLWFQRARWAERGSPERNFYVWRDDDKSYSDAPVLFRHFEDSNWH WDPVAGQYYLHRFLRHQPDLNYDNPQVQEAMLDVLDFWIDRGIDGFRLDAIPFLFEREGTRCEGLPETHAFLRRLRSRAK ERCEQLGREEVLLLAEAIQPVHEAMPYVADDELHSAFNFALTAHLFAAVAHGEVSALQNFLLEFRQLNAGCRWALPLRNH DELWLGDGHLVPEAIVDRVREGFPNAKGHWLNWGINRRLSPLLNGDPRPNKALHALLYSLPGMPCIYYGDELGMGDYPGL RDRDANRTPMAWTSERNGGFSKAPDPLLVLPPITRPGYNCQMMNVAVQKSLQGSLLNWHRNTLLSRRLLPALRYGDFQLL ENSHPGVISYIRQSEEMTILVAVNLSGNPASTRLDLGAWQGQQVREVLGGCPFPVASEHWFAYLSAYDYCWWLIGDVEPE STSSSDAIADSLAVSC >Mature_575_residues PTNSAAELASPWWEGSVIYELIPRCFADGNGDGIGDLDGLKQRLDYLHWLGVDAVWMTPICDSPLRDGGYDITDYKSVHP DLGDLQALDSLIRHAHALGLKVLFDLVLNHTSDMHLWFQRARWAERGSPERNFYVWRDDDKSYSDAPVLFRHFEDSNWHW DPVAGQYYLHRFLRHQPDLNYDNPQVQEAMLDVLDFWIDRGIDGFRLDAIPFLFEREGTRCEGLPETHAFLRRLRSRAKE RCEQLGREEVLLLAEAIQPVHEAMPYVADDELHSAFNFALTAHLFAAVAHGEVSALQNFLLEFRQLNAGCRWALPLRNHD ELWLGDGHLVPEAIVDRVREGFPNAKGHWLNWGINRRLSPLLNGDPRPNKALHALLYSLPGMPCIYYGDELGMGDYPGLR DRDANRTPMAWTSERNGGFSKAPDPLLVLPPITRPGYNCQMMNVAVQKSLQGSLLNWHRNTLLSRRLLPALRYGDFQLLE NSHPGVISYIRQSEEMTILVAVNLSGNPASTRLDLGAWQGQQVREVLGGCPFPVASEHWFAYLSAYDYCWWLIGDVEPES TSSSDAIADSLAVSC
Specific function: Catalyzes the conversion of maltose into alpha,alpha- trehalose by transglucosylation [H]
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=543, Percent_Identity=30.0184162062615, Blast_Score=215, Evalue=1e-55, Organism=Escherichia coli, GI1790687, Length=589, Percent_Identity=29.5415959252971, Blast_Score=219, Evalue=3e-58, Organism=Escherichia coli, GI87081873, Length=374, Percent_Identity=26.7379679144385, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI1786604, Length=504, Percent_Identity=23.8095238095238, Blast_Score=87, Evalue=2e-18, Organism=Caenorhabditis elegans, GI25147709, Length=424, Percent_Identity=25.7075471698113, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI32565753, Length=525, Percent_Identity=21.7142857142857, Blast_Score=88, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6321731, Length=576, Percent_Identity=27.9513888888889, Blast_Score=189, Evalue=8e-49, Organism=Saccharomyces cerevisiae, GI6319776, Length=574, Percent_Identity=28.0487804878049, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322245, Length=571, Percent_Identity=26.9702276707531, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6321726, Length=607, Percent_Identity=27.0181219110379, Blast_Score=182, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6324416, Length=596, Percent_Identity=26.510067114094, Blast_Score=178, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6322241, Length=596, Percent_Identity=26.510067114094, Blast_Score=177, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6322021, Length=596, Percent_Identity=26.510067114094, Blast_Score=177, Evalue=3e-45, Organism=Drosophila melanogaster, GI24583745, Length=547, Percent_Identity=30.8957952468007, Blast_Score=231, Evalue=1e-60, Organism=Drosophila melanogaster, GI24583749, Length=528, Percent_Identity=31.8181818181818, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24583747, Length=522, Percent_Identity=31.992337164751, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24586587, Length=533, Percent_Identity=30.7692307692308, Blast_Score=229, Evalue=5e-60, Organism=Drosophila melanogaster, GI24586599, Length=563, Percent_Identity=28.5968028419183, Blast_Score=212, Evalue=5e-55, Organism=Drosophila melanogaster, GI24586597, Length=518, Percent_Identity=31.0810810810811, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24586593, Length=543, Percent_Identity=29.097605893186, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI24586589, Length=556, Percent_Identity=29.136690647482, Blast_Score=209, Evalue=6e-54, Organism=Drosophila melanogaster, GI24586591, Length=526, Percent_Identity=29.0874524714829, Blast_Score=208, Evalue=9e-54, Organism=Drosophila melanogaster, GI221330053, Length=511, Percent_Identity=29.3542074363992, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI45549022, Length=566, Percent_Identity=28.2685512367491, Blast_Score=206, Evalue=4e-53, Organism=Drosophila melanogaster, GI281360393, Length=490, Percent_Identity=26.9387755102041, Blast_Score=144, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR012810 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.16 [H]
Molecular weight: Translated: 65437; Mature: 65306
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTNSAAELASPWWEGSVIYELIPRCFADGNGDGIGDLDGLKQRLDYLHWLGVDAVWMTP CCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECC ICDSPLRDGGYDITDYKSVHPDLGDLQALDSLIRHAHALGLKVLFDLVLNHTSDMHLWFQ CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RARWAERGSPERNFYVWRDDDKSYSDAPVLFRHFEDSNWHWDPVAGQYYLHRFLRHQPDL HHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCC NYDNPQVQEAMLDVLDFWIDRGIDGFRLDAIPFLFEREGTRCEGLPETHAFLRRLRSRAK CCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH ERCEQLGREEVLLLAEAIQPVHEAMPYVADDELHSAFNFALTAHLFAAVAHGEVSALQNF HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLEFRQLNAGCRWALPLRNHDELWLGDGHLVPEAIVDRVREGFPNAKGHWLNWGINRRLS HHHHHHCCCCCEEEECCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCC PLLNGDPRPNKALHALLYSLPGMPCIYYGDELGMGDYPGLRDRDANRTPMAWTSERNGGF HHCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC SKAPDPLLVLPPITRPGYNCQMMNVAVQKSLQGSLLNWHRNTLLSRRLLPALRYGDFQLL CCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEE ENSHPGVISYIRQSEEMTILVAVNLSGNPASTRLDLGAWQGQQVREVLGGCPFPVASEHW CCCCCHHHHHHHCCCCEEEEEEEEECCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCHHH FAYLSAYDYCWWLIGDVEPESTSSSDAIADSLAVSC HHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure PTNSAAELASPWWEGSVIYELIPRCFADGNGDGIGDLDGLKQRLDYLHWLGVDAVWMTP CCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECC ICDSPLRDGGYDITDYKSVHPDLGDLQALDSLIRHAHALGLKVLFDLVLNHTSDMHLWFQ CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RARWAERGSPERNFYVWRDDDKSYSDAPVLFRHFEDSNWHWDPVAGQYYLHRFLRHQPDL HHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCC NYDNPQVQEAMLDVLDFWIDRGIDGFRLDAIPFLFEREGTRCEGLPETHAFLRRLRSRAK CCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH ERCEQLGREEVLLLAEAIQPVHEAMPYVADDELHSAFNFALTAHLFAAVAHGEVSALQNF HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLEFRQLNAGCRWALPLRNHDELWLGDGHLVPEAIVDRVREGFPNAKGHWLNWGINRRLS HHHHHHCCCCCEEEECCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCC PLLNGDPRPNKALHALLYSLPGMPCIYYGDELGMGDYPGLRDRDANRTPMAWTSERNGGF HHCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC SKAPDPLLVLPPITRPGYNCQMMNVAVQKSLQGSLLNWHRNTLLSRRLLPALRYGDFQLL CCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEE ENSHPGVISYIRQSEEMTILVAVNLSGNPASTRLDLGAWQGQQVREVLGGCPFPVASEHW CCCCCHHHHHHHCCCCEEEEEEEEECCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCHHH FAYLSAYDYCWWLIGDVEPESTSSSDAIADSLAVSC HHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8645698 [H]