| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is hisZ
Identifier: 148242468
GI number: 148242468
Start: 1215086
End: 1216267
Strand: Direct
Name: hisZ
Synonym: SynRCC307_1369
Alternate gene names: 148242468
Gene position: 1215086-1216267 (Clockwise)
Preceding gene: 148242467
Following gene: 148242469
Centisome position: 54.61
GC content: 65.14
Gene sequence:
>1182_bases ATGGCCCTTCAGCCCGCCAGTGGAGCCCGCGACCTCCTGCCCCGCGACGTGGGGGTTAACCGCTGGATTGCCGAGCAACT GGCTGCCGTCTACCAGCGCTGGGGCTACGAAGAGGTCACCCCGCCCAGCCTGGAGCGGATCGACACCCTCGAGGCCGGCG GTGCAATCCAATCGCACCAGGTGGTGCAAGTGGTGGCCGATGAGGCTCTCGGCCTGCGCCCGGAAATGACCGCCAGCATC GCCCGGGCCGCTTGTACGCGCCTGGCAGCCATGCAGCGCCCCCTACGGCTGCACTACCGCGGTTCCACCTTCCAAGCCCA ACGAGCGGAAGACCAAGGTCTGCGCATTGTCGAAGACCTGCAGAGCGGCGTGGAACTGATGGGCGCCAAGGGGCTTGCCG GTGATGCCGAACTGCTGCGTCTGCTGCTCGATGCCGGCTCCCATCTGCCGCTTAGCGCAGAGCATCAGCCCACCCTGCTG ATCGGCCATCAACGGTTGCTGTCGGTGCTGCTCGAAGCTGTGGAGCCATCGCTGCGCAGCACGGTGCGCCGCCACGTCTG CGGACTCAACCGCGTGGCCCTCTCCCAGCTAGAGCTGCCAGGGCAGCAACGCTTGCAACTGCTGCAATTGCTGCAGCTGC GCGGGGAACCCGCAGCGGTACTCAACGGACTTGAAGCCCTGCTGGGAGCAACGGATCTGCTCGCCGAGCTGAAACAGCTG ATCAGCATCATTGAGGAGCAGGCCAGCCGCGCCGGCATTCGCCTGCAGCTAGATCCCACCTTCCATCCCGACTTCGAGCT CTATGACGGGGTGATGGTGAAGTTGGTCTGCCAGGGGCTTGATGCGCCGGTGGCCATCGCCAGTGGCGGCCGCTATGACG CTTTGGTCCAGCGCTTCAGCCCAGTGGGGGCGGTAGCCAGCGGTGTGGGATTCAGCTTTGCCGTTGAGGCGGTGCGTCAA CTGTTGGAGCAAGCCGATCAACTACCCCCGCGGCTAGACGGCCAACTGGTCTTGGTGGCCTACAGCCAGTCCAGCCAATT GCATCCGGCCTTGAACCTGCTGGAGCAGCTGCATCAAAGTGGCCAACCCGCTGAGCTCTGGCCCGAGCCCTGCGCCAACC AAGACGAGGCCCAAGGCATCGCCACACAACGCGGCGTTCAAACGGTTCGCTGGGTGGGTTGA
Upstream 100 bases:
>100_bases TGTTGCAGGGCCTATCCGAATGCCAACCGCTGCCGCCTGCGACCTACAACGCTGAGATCCCCGCTGGTCCATAGGATTCG GCGGCAACCGTGCCGATCGG
Downstream 100 bases:
>100_bases ATCCTTAAGATCAGCGGGTCTGCAAGCCCCTCTTGGCACACACCATCGTCACCAACGTCTGCGAAGGGATCGCCGACTGC GTCGATGCCTGCCCTGTGGC
Product: ATP phosphoribosyltransferase regulatory subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MALQPASGARDLLPRDVGVNRWIAEQLAAVYQRWGYEEVTPPSLERIDTLEAGGAIQSHQVVQVVADEALGLRPEMTASI ARAACTRLAAMQRPLRLHYRGSTFQAQRAEDQGLRIVEDLQSGVELMGAKGLAGDAELLRLLLDAGSHLPLSAEHQPTLL IGHQRLLSVLLEAVEPSLRSTVRRHVCGLNRVALSQLELPGQQRLQLLQLLQLRGEPAAVLNGLEALLGATDLLAELKQL ISIIEEQASRAGIRLQLDPTFHPDFELYDGVMVKLVCQGLDAPVAIASGGRYDALVQRFSPVGAVASGVGFSFAVEAVRQ LLEQADQLPPRLDGQLVLVAYSQSSQLHPALNLLEQLHQSGQPAELWPEPCANQDEAQGIATQRGVQTVRWVG
Sequences:
>Translated_393_residues MALQPASGARDLLPRDVGVNRWIAEQLAAVYQRWGYEEVTPPSLERIDTLEAGGAIQSHQVVQVVADEALGLRPEMTASI ARAACTRLAAMQRPLRLHYRGSTFQAQRAEDQGLRIVEDLQSGVELMGAKGLAGDAELLRLLLDAGSHLPLSAEHQPTLL IGHQRLLSVLLEAVEPSLRSTVRRHVCGLNRVALSQLELPGQQRLQLLQLLQLRGEPAAVLNGLEALLGATDLLAELKQL ISIIEEQASRAGIRLQLDPTFHPDFELYDGVMVKLVCQGLDAPVAIASGGRYDALVQRFSPVGAVASGVGFSFAVEAVRQ LLEQADQLPPRLDGQLVLVAYSQSSQLHPALNLLEQLHQSGQPAELWPEPCANQDEAQGIATQRGVQTVRWVG >Mature_392_residues ALQPASGARDLLPRDVGVNRWIAEQLAAVYQRWGYEEVTPPSLERIDTLEAGGAIQSHQVVQVVADEALGLRPEMTASIA RAACTRLAAMQRPLRLHYRGSTFQAQRAEDQGLRIVEDLQSGVELMGAKGLAGDAELLRLLLDAGSHLPLSAEHQPTLLI GHQRLLSVLLEAVEPSLRSTVRRHVCGLNRVALSQLELPGQQRLQLLQLLQLRGEPAAVLNGLEALLGATDLLAELKQLI SIIEEQASRAGIRLQLDPTFHPDFELYDGVMVKLVCQGLDAPVAIASGGRYDALVQRFSPVGAVASGVGFSFAVEAVRQL LEQADQLPPRLDGQLVLVAYSQSSQLHPALNLLEQLHQSGQPAELWPEPCANQDEAQGIATQRGVQTVRWVG
Specific function: Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
COG id: COG3705
COG function: function code E; ATP phosphoribosyltransferase involved in histidine biosynthesis
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily
Homologues:
Organism=Homo sapiens, GI6996014, Length=408, Percent_Identity=25, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISZ_SYNR3 (A5GTR3)
Other databases:
- EMBL: CT978603 - RefSeq: YP_001227625.1 - ProteinModelPortal: A5GTR3 - SMR: A5GTR3 - STRING: A5GTR3 - GeneID: 5156780 - GenomeReviews: CT978603_GR - KEGG: syr:SynRCC307_1369 - eggNOG: COG3705 - HOGENOM: HBG616575 - OMA: YREHVKS - ProtClustDB: PRK12292 - GO: GO:0005737 - HAMAP: MF_00125 - InterPro: IPR006195 - InterPro: IPR004516 - PANTHER: PTHR11476 - PIRSF: PIRSF001549
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42616; Mature: 42485
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQPASGARDLLPRDVGVNRWIAEQLAAVYQRWGYEEVTPPSLERIDTLEAGGAIQSHQ CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHH VVQVVADEALGLRPEMTASIARAACTRLAAMQRPLRLHYRGSTFQAQRAEDQGLRIVEDL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCHHCCHHHHHHH QSGVELMGAKGLAGDAELLRLLLDAGSHLPLSAEHQPTLLIGHQRLLSVLLEAVEPSLRS HHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCHHHHH TVRRHVCGLNRVALSQLELPGQQRLQLLQLLQLRGEPAAVLNGLEALLGATDLLAELKQL HHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ISIIEEQASRAGIRLQLDPTFHPDFELYDGVMVKLVCQGLDAPVAIASGGRYDALVQRFS HHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHC PVGAVASGVGFSFAVEAVRQLLEQADQLPPRLDGQLVLVAYSQSSQLHPALNLLEQLHQS HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHC GQPAELWPEPCANQDEAQGIATQRGVQTVRWVG CCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure ALQPASGARDLLPRDVGVNRWIAEQLAAVYQRWGYEEVTPPSLERIDTLEAGGAIQSHQ CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHH VVQVVADEALGLRPEMTASIARAACTRLAAMQRPLRLHYRGSTFQAQRAEDQGLRIVEDL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCHHCCHHHHHHH QSGVELMGAKGLAGDAELLRLLLDAGSHLPLSAEHQPTLLIGHQRLLSVLLEAVEPSLRS HHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCHHHHH TVRRHVCGLNRVALSQLELPGQQRLQLLQLLQLRGEPAAVLNGLEALLGATDLLAELKQL HHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ISIIEEQASRAGIRLQLDPTFHPDFELYDGVMVKLVCQGLDAPVAIASGGRYDALVQRFS HHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHC PVGAVASGVGFSFAVEAVRQLLEQADQLPPRLDGQLVLVAYSQSSQLHPALNLLEQLHQS HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHC GQPAELWPEPCANQDEAQGIATQRGVQTVRWVG CCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA