| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is ubiE [H]
Identifier: 148242396
GI number: 148242396
Start: 1152509
End: 1153558
Strand: Direct
Name: ubiE [H]
Synonym: SynRCC307_1297
Alternate gene names: 148242396
Gene position: 1152509-1153558 (Clockwise)
Preceding gene: 148242395
Following gene: 148242397
Centisome position: 51.8
GC content: 58.29
Gene sequence:
>1050_bases ATGAGCGACCCCGTCACCAAGCTGGCGTACCAAACCATGCAGCAGGGCAAAAGCCTGTTGGGTTTGGCCCATAAAGAGGT GAGCACTCGCCTGATGGATCTGGTTGCTCCCCAGGCCAGCGCCAGCACAGTGCCTGTGCCCCCCGAAATGCTGGGGGAGC TGCGCAGCAGCATGAACGAGCTGCTGGAGCTGGATTGGAAAGAAGCGCAGCATGGCCTCTATCCCACCTCGTTGCTGTTT GACGCTCCCTGGCTCGATTGGGCTGTTCGATACCCCCTGGTCTGGCTGGATCTGCCCTCCATCTGGCAGCGCCGCACGCG GCGGGATGTGACCGATCTACCGGTGGAGATCAACCCCAAGGATTACCCGGACTATTACCTCCAAAACTTCCACCACCAAA CCGATGGCTACCTGAGTGATCGCTCAGCAGAGCTGTATGACCTGCAGGTGGAAATTCTGTTCAATGGCACTGCTGATGCG ATGCGGCGTCGCCTAATCCGTCCATTGCTCAATCAGCTGGGTGGCCGTCGTGCCGATGCCATTCGCGTGCTGGACATTGC CACCGGCACCGGTCGCACCTTGCGCCAGCTGCGGGGAGCGTTGCCGAAAGCGCAGTTGGTGGGCCTGGATCTCTCCTCCT CCTACCTGCGTCAAGCCAGCCGTTGGCTGTCAGAGATTCCTGGCGAATTACCGCAGCTGGTCCAAGGCAATGGTGAGGAG CTTCCCTTCGCCAACGAGGTGATGCAGGCGGCGACCTGTGTGTTCCTGTTCCATGAGCTTCCTGGTGAGGCCCGCCAAAA GGTGCTGGACGAGGCTTGGCGCGTGCTGGAGCCCGGTGGTGTGCTGGTGCTAGCGGATTCGATTCAGCTGGATGACAGCC CTACATTTGGCGCCGTGATGGAGAACTTCAGGCGCGTTTTCCATGAGCCTTATTACCGCGATTACATTGCAGATAACATT CCAGAAAGACTGCAGCGCAGTGGCTTTGAGGTCATTGAAGCCAAATCTTATTTTATGACGAGAGTTTGGACAGCTCGCAA ATCTGGTTGA
Upstream 100 bases:
>100_bases CGACGTTTCATCCCAAGGGGGCCGAAGGGCCCCCTTTTTTTGTGTCTAGGCCACGTTTTTAGTCTGGATCGGTTGAAATG GGTGATCCCCAGAAAGGGCC
Downstream 100 bases:
>100_bases TATAAACCTATATGCGGTAGATATTCAGATCGCAACATAAAGTGGAAGAAAGTTGTAACTTGAACGATTCTTAGCTCCAA TGGGGCTGTAACAGGGGCCG
Product: SAM-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MSDPVTKLAYQTMQQGKSLLGLAHKEVSTRLMDLVAPQASASTVPVPPEMLGELRSSMNELLELDWKEAQHGLYPTSLLF DAPWLDWAVRYPLVWLDLPSIWQRRTRRDVTDLPVEINPKDYPDYYLQNFHHQTDGYLSDRSAELYDLQVEILFNGTADA MRRRLIRPLLNQLGGRRADAIRVLDIATGTGRTLRQLRGALPKAQLVGLDLSSSYLRQASRWLSEIPGELPQLVQGNGEE LPFANEVMQAATCVFLFHELPGEARQKVLDEAWRVLEPGGVLVLADSIQLDDSPTFGAVMENFRRVFHEPYYRDYIADNI PERLQRSGFEVIEAKSYFMTRVWTARKSG
Sequences:
>Translated_349_residues MSDPVTKLAYQTMQQGKSLLGLAHKEVSTRLMDLVAPQASASTVPVPPEMLGELRSSMNELLELDWKEAQHGLYPTSLLF DAPWLDWAVRYPLVWLDLPSIWQRRTRRDVTDLPVEINPKDYPDYYLQNFHHQTDGYLSDRSAELYDLQVEILFNGTADA MRRRLIRPLLNQLGGRRADAIRVLDIATGTGRTLRQLRGALPKAQLVGLDLSSSYLRQASRWLSEIPGELPQLVQGNGEE LPFANEVMQAATCVFLFHELPGEARQKVLDEAWRVLEPGGVLVLADSIQLDDSPTFGAVMENFRRVFHEPYYRDYIADNI PERLQRSGFEVIEAKSYFMTRVWTARKSG >Mature_348_residues SDPVTKLAYQTMQQGKSLLGLAHKEVSTRLMDLVAPQASASTVPVPPEMLGELRSSMNELLELDWKEAQHGLYPTSLLFD APWLDWAVRYPLVWLDLPSIWQRRTRRDVTDLPVEINPKDYPDYYLQNFHHQTDGYLSDRSAELYDLQVEILFNGTADAM RRRLIRPLLNQLGGRRADAIRVLDIATGTGRTLRQLRGALPKAQLVGLDLSSSYLRQASRWLSEIPGELPQLVQGNGEEL PFANEVMQAATCVFLFHELPGEARQKVLDEAWRVLEPGGVLVLADSIQLDDSPTFGAVMENFRRVFHEPYYRDYIADNIP ERLQRSGFEVIEAKSYFMTRVWTARKSG
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: NA
Molecular weight: Translated: 39773; Mature: 39642
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPVTKLAYQTMQQGKSLLGLAHKEVSTRLMDLVAPQASASTVPVPPEMLGELRSSMNE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH LLELDWKEAQHGLYPTSLLFDAPWLDWAVRYPLVWLDLPSIWQRRTRRDVTDLPVEINPK HHHCCHHHHHCCCCCHHHHHCCCHHHHHHHCCEEEECCHHHHHHHHHCCHHCCCEECCCC DYPDYYLQNFHHQTDGYLSDRSAELYDLQVEILFNGTADAMRRRLIRPLLNQLGGRRADA CCCHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCC IRVLDIATGTGRTLRQLRGALPKAQLVGLDLSSSYLRQASRWLSEIPGELPQLVQGNGEE EEEEEECCCCCHHHHHHHCCCCCHHEEECCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCC LPFANEVMQAATCVFLFHELPGEARQKVLDEAWRVLEPGGVLVLADSIQLDDSPTFGAVM CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCEECCCCCCHHHHH ENFRRVFHEPYYRDYIADNIPERLQRSGFEVIEAKSYFMTRVWTARKSG HHHHHHHHCCHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDPVTKLAYQTMQQGKSLLGLAHKEVSTRLMDLVAPQASASTVPVPPEMLGELRSSMNE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH LLELDWKEAQHGLYPTSLLFDAPWLDWAVRYPLVWLDLPSIWQRRTRRDVTDLPVEINPK HHHCCHHHHHCCCCCHHHHHCCCHHHHHHHCCEEEECCHHHHHHHHHCCHHCCCEECCCC DYPDYYLQNFHHQTDGYLSDRSAELYDLQVEILFNGTADAMRRRLIRPLLNQLGGRRADA CCCHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCC IRVLDIATGTGRTLRQLRGALPKAQLVGLDLSSSYLRQASRWLSEIPGELPQLVQGNGEE EEEEEECCCCCHHHHHHHCCCCCHHEEECCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCC LPFANEVMQAATCVFLFHELPGEARQKVLDEAWRVLEPGGVLVLADSIQLDDSPTFGAVM CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCEECCCCCCHHHHH ENFRRVFHEPYYRDYIADNIPERLQRSGFEVIEAKSYFMTRVWTARKSG HHHHHHHHCCHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA