| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242341
Identifier: 148242341
GI number: 148242341
Start: 1099896
End: 1100192
Strand: Direct
Name: 148242341
Synonym: SynRCC307_1242
Alternate gene names: NA
Gene position: 1099896-1100192 (Clockwise)
Preceding gene: 148242337
Following gene: 148242345
Centisome position: 49.44
GC content: 62.29
Gene sequence:
>297_bases TTGGCCAAGGCCCTGCTGCTGCTACTGACCATTGGCATGGCCGTGCCTGGCCTCGCCCAGGAATGTCGTGGCAAAGATGG AGCTTGGCAGCAGTGTTCCTTGGACTGGATCGATCCAGGCCGCCGCTGGGATCTGCGCTTGCCTAATGAGCACTGGCAAA TCAGCCACGACGGCAGTGGTTCCATGCAAATTCGCGAAGCTGGGGGCCAGTGGGTTCCTGCTCAAGCGCGCTGGCAGGAG CCAGGGGTGTTGTGCTGGGGAGAGCTCTGTGCCCGTGGGCCCTTGCCCCTCGATTAA
Upstream 100 bases:
>100_bases TAACGGGGCAAAGCGAACAAGCAATCGCAACGATCTTCGCAGTTGCTGCTGCCAAATCTTTTTTTGATGGGCATGGTGAA AAAAACGCCCCCACGCCCCG
Downstream 100 bases:
>100_bases GCCTGCAGGGAAGCGAGTTGCGCCGCCAAGCGGCTCTGATCGGGGGATCGGCCAATCAACACCAGGTTGAGCTGGTCGCT GCTGGCTTGGTCCGCTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MAKALLLLLTIGMAVPGLAQECRGKDGAWQQCSLDWIDPGRRWDLRLPNEHWQISHDGSGSMQIREAGGQWVPAQARWQE PGVLCWGELCARGPLPLD
Sequences:
>Translated_98_residues MAKALLLLLTIGMAVPGLAQECRGKDGAWQQCSLDWIDPGRRWDLRLPNEHWQISHDGSGSMQIREAGGQWVPAQARWQE PGVLCWGELCARGPLPLD >Mature_97_residues AKALLLLLTIGMAVPGLAQECRGKDGAWQQCSLDWIDPGRRWDLRLPNEHWQISHDGSGSMQIREAGGQWVPAQARWQEP GVLCWGELCARGPLPLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10902; Mature: 10770
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKALLLLLTIGMAVPGLAQECRGKDGAWQQCSLDWIDPGRRWDLRLPNEHWQISHDGSG CCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCC SMQIREAGGQWVPAQARWQEPGVLCWGELCARGPLPLD CEEEECCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCC >Mature Secondary Structure AKALLLLLTIGMAVPGLAQECRGKDGAWQQCSLDWIDPGRRWDLRLPNEHWQISHDGSG CHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCC SMQIREAGGQWVPAQARWQEPGVLCWGELCARGPLPLD CEEEECCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA