| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242331
Identifier: 148242331
GI number: 148242331
Start: 1092916
End: 1093608
Strand: Direct
Name: 148242331
Synonym: SynRCC307_1232
Alternate gene names: NA
Gene position: 1092916-1093608 (Clockwise)
Preceding gene: 148242330
Following gene: 148242332
Centisome position: 49.12
GC content: 57.72
Gene sequence:
>693_bases ATGAAGGGCAGACTGGGCAGCGATTGCCTGGGGGTCATGGCTCGTCTTTTGCCGCTATTGCTTCTGCTTGTCAGCTTGGC GCTGCCTGCCTTGCCGGCTTTGGCTGTTGCTCCCGCAGACTTTCCAGCCGGCGCACCCGAGGGCCACGTGTTGGATTCAG CCGATGTGCTGAGCCGGGCCTCCACTGGTGAATTGGGTGCACGCTTAGCCAACTTTGAGAGCGATCACATCAATGCGAAT TTGGTGACGGTTAAGCGTCTCGACTACAACGTTGACCTTGATTTGTTTGCCTCTGAGCTGCTCAGCCGCTGGCACGGTTC CGACGATGACAGTGATCTGTTGATCGCGATTGATTCAGGGGCCAACGCAGCTCGTATTGCTGCCGACCCCACCCTGTTGC AGCGTTTGCCCAATGCGCTGCTTGAGAGCACAGCCGATGAAACGATGTCGGTAGCCCTGCGCGATGGTGGCCGTTACCGC CAGGCCACGATTGATGCCCTCTCCCGACTGGAAACGGTCTTAGCTGGTCAAGAAGATCCCGGTCCTCCCGAACTGATTGA GCAAGTGGCCGTTGTGAGCAATGTCCCAACCAAGGAAGAGACCGAAGAGAGCAATGCCTTGATTTGGGTGGCCGTGCTGT TGGTTTTGGGAACGCTTGTGCCGATGGCCACTTGGTGGGTGTTCTCTCGCTGA
Upstream 100 bases:
>100_bases ATCAGCTCGCCGGCCATTTGGCCCTACCCGAGACGATGAGCCAGCAGATCATCACGGTGATGGACATCTTGCACCGTGAC GCTTTGGCCATGGCGGGCGA
Downstream 100 bases:
>100_bases ACCTCGGCATCATGGGCTGACGCCCAGTTCGACGGCATGGGACTGAATGACTGGCTTGGCACCTTTGCCAAGGCCGAAGG ACTGGATTTGAGTAGCGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKGRLGSDCLGVMARLLPLLLLLVSLALPALPALAVAPADFPAGAPEGHVLDSADVLSRASTGELGARLANFESDHINAN LVTVKRLDYNVDLDLFASELLSRWHGSDDDSDLLIAIDSGANAARIAADPTLLQRLPNALLESTADETMSVALRDGGRYR QATIDALSRLETVLAGQEDPGPPELIEQVAVVSNVPTKEETEESNALIWVAVLLVLGTLVPMATWWVFSR
Sequences:
>Translated_230_residues MKGRLGSDCLGVMARLLPLLLLLVSLALPALPALAVAPADFPAGAPEGHVLDSADVLSRASTGELGARLANFESDHINAN LVTVKRLDYNVDLDLFASELLSRWHGSDDDSDLLIAIDSGANAARIAADPTLLQRLPNALLESTADETMSVALRDGGRYR QATIDALSRLETVLAGQEDPGPPELIEQVAVVSNVPTKEETEESNALIWVAVLLVLGTLVPMATWWVFSR >Mature_230_residues MKGRLGSDCLGVMARLLPLLLLLVSLALPALPALAVAPADFPAGAPEGHVLDSADVLSRASTGELGARLANFESDHINAN LVTVKRLDYNVDLDLFASELLSRWHGSDDDSDLLIAIDSGANAARIAADPTLLQRLPNALLESTADETMSVALRDGGRYR QATIDALSRLETVLAGQEDPGPPELIEQVAVVSNVPTKEETEESNALIWVAVLLVLGTLVPMATWWVFSR
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24496; Mature: 24496
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGRLGSDCLGVMARLLPLLLLLVSLALPALPALAVAPADFPAGAPEGHVLDSADVLSRA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHHC STGELGARLANFESDHINANLVTVKRLDYNVDLDLFASELLSRWHGSDDDSDLLIAIDSG CCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECC ANAARIAADPTLLQRLPNALLESTADETMSVALRDGGRYRQATIDALSRLETVLAGQEDP CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC GPPELIEQVAVVSNVPTKEETEESNALIWVAVLLVLGTLVPMATWWVFSR CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKGRLGSDCLGVMARLLPLLLLLVSLALPALPALAVAPADFPAGAPEGHVLDSADVLSRA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHHC STGELGARLANFESDHINANLVTVKRLDYNVDLDLFASELLSRWHGSDDDSDLLIAIDSG CCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECC ANAARIAADPTLLQRLPNALLESTADETMSVALRDGGRYRQATIDALSRLETVLAGQEDP CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC GPPELIEQVAVVSNVPTKEETEESNALIWVAVLLVLGTLVPMATWWVFSR CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA