| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242305
Identifier: 148242305
GI number: 148242305
Start: 1062807
End: 1063400
Strand: Direct
Name: 148242305
Synonym: SynRCC307_1206
Alternate gene names: NA
Gene position: 1062807-1063400 (Clockwise)
Preceding gene: 148242304
Following gene: 148242307
Centisome position: 47.77
GC content: 60.61
Gene sequence:
>594_bases ATGGGTCTGTTTGATCGCTTCCGCCAAAAGCCTGGTGAGTCTGAAGGTGGAGATAAGAGCTTTTTCCTAGATGCTGATAA ATCCAGCAGCCTGGGTGATGTGGATTTCATGCGCCGCTCCAACACAATCCGCCGCACCTTCCCTGGCACGGCTGAAAACC CTGGGATGAAAGAGCGCATCGAAGAGGTTGCTTCGATGGAAGCCCAGATGGCCAAGGTCTCCGAGGGCCTGCCCGAAGCT GGTGGTAATCAGTCCGTTGCACGCGTCGATCCCGGTGTCCCCAAACCGGTGAAAAAGACCTTCGCCCAGCCGATGTCCCA GCAAGAGCTGAAGGAGCGCATGAAGGGATCAGCCCTGGGCACCAACGTGCCGGGCACCAGTTCCAAATCCGCGCCGGTTG CCAGTTCAACGCCGGCTCCTGCAGCCCAACCCAGTCAGCCCGCGGCTGCCCCCCAGATGGCCCCTGTTCCGCCAATGCCG ACCGTTGGCAGTGGCAACGCTCCGGCGCCCAAGTCTGCTCCCAGCAGCGCTCCTGGCTCCGCCAAGCCTGGCTCGATTGA TCCTTTCAAGGACATGCTCAAGGACATGCGCTGA
Upstream 100 bases:
>100_bases TCACTGGCTGGCGATCTCAACCTTTTGCAGACCTGTGGCACCGATAGCCACGGTTTAAGCCTCAAAGGCCGCTAAATTCG GCGGATTCTTATGGACAGTT
Downstream 100 bases:
>100_bases GTTCAGCGCTGATTGCCTGTTTCAATTTGCTGCTCACTACTGAGCACCAAAGCTCGCAATTCATCGAGTTGTTGTGGATC GGCTGATTCCCAGAGACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MGLFDRFRQKPGESEGGDKSFFLDADKSSSLGDVDFMRRSNTIRRTFPGTAENPGMKERIEEVASMEAQMAKVSEGLPEA GGNQSVARVDPGVPKPVKKTFAQPMSQQELKERMKGSALGTNVPGTSSKSAPVASSTPAPAAQPSQPAAAPQMAPVPPMP TVGSGNAPAPKSAPSSAPGSAKPGSIDPFKDMLKDMR
Sequences:
>Translated_197_residues MGLFDRFRQKPGESEGGDKSFFLDADKSSSLGDVDFMRRSNTIRRTFPGTAENPGMKERIEEVASMEAQMAKVSEGLPEA GGNQSVARVDPGVPKPVKKTFAQPMSQQELKERMKGSALGTNVPGTSSKSAPVASSTPAPAAQPSQPAAAPQMAPVPPMP TVGSGNAPAPKSAPSSAPGSAKPGSIDPFKDMLKDMR >Mature_196_residues GLFDRFRQKPGESEGGDKSFFLDADKSSSLGDVDFMRRSNTIRRTFPGTAENPGMKERIEEVASMEAQMAKVSEGLPEAG GNQSVARVDPGVPKPVKKTFAQPMSQQELKERMKGSALGTNVPGTSSKSAPVASSTPAPAAQPSQPAAAPQMAPVPPMPT VGSGNAPAPKSAPSSAPGSAKPGSIDPFKDMLKDMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20541; Mature: 20410
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFDRFRQKPGESEGGDKSFFLDADKSSSLGDVDFMRRSNTIRRTFPGTAENPGMKERI CCHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCHHHHH EEVASMEAQMAKVSEGLPEAGGNQSVARVDPGVPKPVKKTFAQPMSQQELKERMKGSALG HHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCC TNVPGTSSKSAPVASSTPAPAAQPSQPAAAPQMAPVPPMPTVGSGNAPAPKSAPSSAPGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AKPGSIDPFKDMLKDMR CCCCCCCHHHHHHHHCC >Mature Secondary Structure GLFDRFRQKPGESEGGDKSFFLDADKSSSLGDVDFMRRSNTIRRTFPGTAENPGMKERI CHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCHHHHH EEVASMEAQMAKVSEGLPEAGGNQSVARVDPGVPKPVKKTFAQPMSQQELKERMKGSALG HHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCC TNVPGTSSKSAPVASSTPAPAAQPSQPAAAPQMAPVPPMPTVGSGNAPAPKSAPSSAPGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AKPGSIDPFKDMLKDMR CCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA