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The map label for this gene is 148242302

Identifier: 148242302

GI number: 148242302

Start: 1060025

End: 1061551

Strand: Direct

Name: 148242302

Synonym: SynRCC307_1203

Alternate gene names: NA

Gene position: 1060025-1061551 (Clockwise)

Preceding gene: 148242300

Following gene: 148242303

Centisome position: 47.64

GC content: 59.53

Gene sequence:

>1527_bases
ATGGCCATCGCCATCTGGGTTCTCAATGACCAGCTGCATCAGGCCCAGGCAGCCCTAGCCAGCTATGAACCCGGCGAGGC
CTCGGTGGTGTTTGTGGAGGCTGAAGCTCTGCTGCGGGTGCGGCCTCACCTGCAAAAACAAATCCTGTTCTGGAGCGCAC
AACGACATTTCGCGGCCGAATTGCAGACAGCTGGTTGGGACGTGCATCAGCTGGAGGCGGTGTCCCACGCCGAAGCTCTG
ATTCCTTGGTTGAAGCAACAGGGCATCAGCCGTTTGGTGGTGATGGCACCACCGGATCGGCCGATTCGCCAAGCCATTGA
ACGCTTATCCCAACAACCGGAGTGGCCCTGCGAGCTGGAGTGGATTGAGAACAACCAATTCCTTTGGATAGCAGAGGAAT
TCAGTCGTTGGGCCGGCAGCAAAAAGCAGCTCCGCATGGAGTTCTTTTATCGGGAGGGGCGACGTCGCTTCGACGTGCTG
ATGGATGGGGACCAGCCCCAAGGCGGTCAGTGGAACTTTGACCAAGACAACCGCAAGCCGCCACCGAAAGGCCTTGAGGG
GCCTGAGCCCCTGTGGTTTGAGCCCGACGCGATCACCAGCGCTGTGATCTCCAAGCTCAACCGCTTGGCTGAGCGCTACG
AGCTCCCTGGCACGAGCGACCCCTTCCGCTGGGGCGTGAGCCAACAGCAAGCGCAGGAGGTGCTGGAGCACTTCATCGCC
ACTCGCCTCGAGGGTTTTGGTCCCTACCAAGACGCCATGGTCAGCGGCCAGCCCACCCTGTGGCATGCGCTGATCAGCCC
CTACATCAATCTCGGTTTGCTCCAGCCCTTGGCCGTGATTCGCCAGCTTGAGCACGCCGGGCGTGAACGCGAGATTCCTT
TGGCAAGCCTGGAAGGTGTGATCAGGCAGCTCCTGGGTTGGCGTGAATTCACCCATGGTCTCTATCACCATTTCGGCGAG
GACTACAGCCACAGCAATGCCTTAGAGGCTCTGGAGCCTCTACCGGAGTTTTTGCATCAGCTGGGGGGCAGTGGAATGGG
CTGCGTTGACACCGTGCTGGGTGAACTCAACGAGCGGGGCTATGCCCACCACATTCAGCGCTTGATGGTGCTCACCAACT
TGGGCTTGATGGCGGGTTGGAATCCCCAAGACCTCACCAGCTGGTTTCAAGCTCAATTTGTCGATGCCCACCACTGGGTG
ATGCAAACCAATGTTTTAGGGATGGGACTCTGGGCTGATGGCGGCCGGCTGGGCAGCAAGCCCTATGCCGCCAGCGGCCG
CTACATCAACAAGATGAGCACCTATTGCAAGGGCTGCCGCTTTGATCAAACCAAGCGCAGTGGCCCTGAGGCTTGTCCCT
TCAACGTTCTCTATTGGGATTTCATGGCGCGCCACCAAGAGCGTTTCCGCAACCATCCGCGCATGGCCCTGATGATTCGC
CAGCTCGATCGCATCGACCCAGCGGAGCTTGAAGCGATCCGATCAACGGCATGCGGGCTTGAATGGGCTCAACCCCCTGC
TGCCTGA

Upstream 100 bases:

>100_bases
CGTTTGGCACTGGCCAGACCGCCAGAGCCAGCGCCGATGACGAGCAAGTCAAAGTCCATGCAGTGCGCGACAGGATGACC
CCCATCTTGCGCGTGATCTG

Downstream 100 bases:

>100_bases
TGGCCCTGAGCCTTCCGCCCGAGAGTTACCTGTGGTTCAAAACCTTCCACATCATTGGTGTGGTGGTTTGGTTTGCCGGG
CTGTTCTATCTCGTGCGGCT

Product: deoxyribodipyrimidine photolyase-like protein protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MAIAIWVLNDQLHQAQAALASYEPGEASVVFVEAEALLRVRPHLQKQILFWSAQRHFAAELQTAGWDVHQLEAVSHAEAL
IPWLKQQGISRLVVMAPPDRPIRQAIERLSQQPEWPCELEWIENNQFLWIAEEFSRWAGSKKQLRMEFFYREGRRRFDVL
MDGDQPQGGQWNFDQDNRKPPPKGLEGPEPLWFEPDAITSAVISKLNRLAERYELPGTSDPFRWGVSQQQAQEVLEHFIA
TRLEGFGPYQDAMVSGQPTLWHALISPYINLGLLQPLAVIRQLEHAGREREIPLASLEGVIRQLLGWREFTHGLYHHFGE
DYSHSNALEALEPLPEFLHQLGGSGMGCVDTVLGELNERGYAHHIQRLMVLTNLGLMAGWNPQDLTSWFQAQFVDAHHWV
MQTNVLGMGLWADGGRLGSKPYAASGRYINKMSTYCKGCRFDQTKRSGPEACPFNVLYWDFMARHQERFRNHPRMALMIR
QLDRIDPAELEAIRSTACGLEWAQPPAA

Sequences:

>Translated_508_residues
MAIAIWVLNDQLHQAQAALASYEPGEASVVFVEAEALLRVRPHLQKQILFWSAQRHFAAELQTAGWDVHQLEAVSHAEAL
IPWLKQQGISRLVVMAPPDRPIRQAIERLSQQPEWPCELEWIENNQFLWIAEEFSRWAGSKKQLRMEFFYREGRRRFDVL
MDGDQPQGGQWNFDQDNRKPPPKGLEGPEPLWFEPDAITSAVISKLNRLAERYELPGTSDPFRWGVSQQQAQEVLEHFIA
TRLEGFGPYQDAMVSGQPTLWHALISPYINLGLLQPLAVIRQLEHAGREREIPLASLEGVIRQLLGWREFTHGLYHHFGE
DYSHSNALEALEPLPEFLHQLGGSGMGCVDTVLGELNERGYAHHIQRLMVLTNLGLMAGWNPQDLTSWFQAQFVDAHHWV
MQTNVLGMGLWADGGRLGSKPYAASGRYINKMSTYCKGCRFDQTKRSGPEACPFNVLYWDFMARHQERFRNHPRMALMIR
QLDRIDPAELEAIRSTACGLEWAQPPAA
>Mature_507_residues
AIAIWVLNDQLHQAQAALASYEPGEASVVFVEAEALLRVRPHLQKQILFWSAQRHFAAELQTAGWDVHQLEAVSHAEALI
PWLKQQGISRLVVMAPPDRPIRQAIERLSQQPEWPCELEWIENNQFLWIAEEFSRWAGSKKQLRMEFFYREGRRRFDVLM
DGDQPQGGQWNFDQDNRKPPPKGLEGPEPLWFEPDAITSAVISKLNRLAERYELPGTSDPFRWGVSQQQAQEVLEHFIAT
RLEGFGPYQDAMVSGQPTLWHALISPYINLGLLQPLAVIRQLEHAGREREIPLASLEGVIRQLLGWREFTHGLYHHFGED
YSHSNALEALEPLPEFLHQLGGSGMGCVDTVLGELNERGYAHHIQRLMVLTNLGLMAGWNPQDLTSWFQAQFVDAHHWVM
QTNVLGMGLWADGGRLGSKPYAASGRYINKMSTYCKGCRFDQTKRSGPEACPFNVLYWDFMARHQERFRNHPRMALMIRQ
LDRIDPAELEAIRSTACGLEWAQPPAA

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58092; Mature: 57961

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIAIWVLNDQLHQAQAALASYEPGEASVVFVEAEALLRVRPHLQKQILFWSAQRHFAAE
CEEEEEEECHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQTAGWDVHQLEAVSHAEALIPWLKQQGISRLVVMAPPDRPIRQAIERLSQQPEWPCELE
HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEE
WIENNQFLWIAEEFSRWAGSKKQLRMEFFYREGRRRFDVLMDGDQPQGGQWNFDQDNRKP
EECCCCEEEEEHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC
PPKGLEGPEPLWFEPDAITSAVISKLNRLAERYELPGTSDPFRWGVSQQQAQEVLEHFIA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHH
TRLEGFGPYQDAMVSGQPTLWHALISPYINLGLLQPLAVIRQLEHAGREREIPLASLEGV
HHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IRQLLGWREFTHGLYHHFGEDYSHSNALEALEPLPEFLHQLGGSGMGCVDTVLGELNERG
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCH
YAHHIQRLMVLTNLGLMAGWNPQDLTSWFQAQFVDAHHWVMQTNVLGMGLWADGGRLGSK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCC
PYAASGRYINKMSTYCKGCRFDQTKRSGPEACPFNVLYWDFMARHQERFRNHPRMALMIR
CCCCCCCHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
QLDRIDPAELEAIRSTACGLEWAQPPAA
HHHCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AIAIWVLNDQLHQAQAALASYEPGEASVVFVEAEALLRVRPHLQKQILFWSAQRHFAAE
EEEEEEECHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQTAGWDVHQLEAVSHAEALIPWLKQQGISRLVVMAPPDRPIRQAIERLSQQPEWPCELE
HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEE
WIENNQFLWIAEEFSRWAGSKKQLRMEFFYREGRRRFDVLMDGDQPQGGQWNFDQDNRKP
EECCCCEEEEEHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC
PPKGLEGPEPLWFEPDAITSAVISKLNRLAERYELPGTSDPFRWGVSQQQAQEVLEHFIA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHH
TRLEGFGPYQDAMVSGQPTLWHALISPYINLGLLQPLAVIRQLEHAGREREIPLASLEGV
HHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IRQLLGWREFTHGLYHHFGEDYSHSNALEALEPLPEFLHQLGGSGMGCVDTVLGELNERG
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCH
YAHHIQRLMVLTNLGLMAGWNPQDLTSWFQAQFVDAHHWVMQTNVLGMGLWADGGRLGSK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCC
PYAASGRYINKMSTYCKGCRFDQTKRSGPEACPFNVLYWDFMARHQERFRNHPRMALMIR
CCCCCCCHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
QLDRIDPAELEAIRSTACGLEWAQPPAA
HHHCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA