| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242212
Identifier: 148242212
GI number: 148242212
Start: 983062
End: 983487
Strand: Direct
Name: 148242212
Synonym: SynRCC307_1113
Alternate gene names: NA
Gene position: 983062-983487 (Clockwise)
Preceding gene: 148242211
Following gene: 148242213
Centisome position: 44.18
GC content: 61.5
Gene sequence:
>426_bases ATGGATTCCCTTACTGCGTTTGCCGCCATTGGCCTGACGGCTGTGGCCTGGGATGGTTCGCTCACCCCCGCTGGTGGTCG CGCGTTCCGTCATGCCCTCGACTACCGCGAGCCCTACTGCTCCCTCAATGAGCAAGACATGGTGGAGTTGATGGATTGCC TGCTGACCCGTCGCCGCGAAATCGGCAACACAGCTCTGATGCTTGAGGCCGCACAAGCCCTCAGCAGCACGCAATCGCTC ACGGCCTACGCCATGGCGTCCGAGTTGATGCGCTCCGATGGCCCCTACGAGGCCGATGAGCGGCGCCACTTGGACCACCT GGCACTGATCCTGTCGATCGCGAAGCCTGAATCCGATCGCATCGATTCGGTTTTTGATGTGTTGCACAACCGTCTGGCCC TGCGCTCAGAGCTCCAACCGGCTTGA
Upstream 100 bases:
>100_bases CCGATGGAAATCATTGCTGTGCTTGGAATCATCGGCATCAGTGCGGCAATCGCCGCGAAGTTGACGCCGACATCAAAACC AGACGCCTGATCGTGCCCTG
Downstream 100 bases:
>100_bases AGCTGGCTAAACAAGGGGCATGACCTCTTGGCTCGATTCGCTCCGCTGGCCGGTGGCGTTGGTGATCGTGGTGTGGCTGT TGACGCGCGCTGCGATCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MDSLTAFAAIGLTAVAWDGSLTPAGGRAFRHALDYREPYCSLNEQDMVELMDCLLTRRREIGNTALMLEAAQALSSTQSL TAYAMASELMRSDGPYEADERRHLDHLALILSIAKPESDRIDSVFDVLHNRLALRSELQPA
Sequences:
>Translated_141_residues MDSLTAFAAIGLTAVAWDGSLTPAGGRAFRHALDYREPYCSLNEQDMVELMDCLLTRRREIGNTALMLEAAQALSSTQSL TAYAMASELMRSDGPYEADERRHLDHLALILSIAKPESDRIDSVFDVLHNRLALRSELQPA >Mature_141_residues MDSLTAFAAIGLTAVAWDGSLTPAGGRAFRHALDYREPYCSLNEQDMVELMDCLLTRRREIGNTALMLEAAQALSSTQSL TAYAMASELMRSDGPYEADERRHLDHLALILSIAKPESDRIDSVFDVLHNRLALRSELQPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15596; Mature: 15596
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSLTAFAAIGLTAVAWDGSLTPAGGRAFRHALDYREPYCSLNEQDMVELMDCLLTRRRE CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH IGNTALMLEAAQALSSTQSLTAYAMASELMRSDGPYEADERRHLDHLALILSIAKPESDR HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCH IDSVFDVLHNRLALRSELQPA HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDSLTAFAAIGLTAVAWDGSLTPAGGRAFRHALDYREPYCSLNEQDMVELMDCLLTRRRE CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH IGNTALMLEAAQALSSTQSLTAYAMASELMRSDGPYEADERRHLDHLALILSIAKPESDR HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCH IDSVFDVLHNRLALRSELQPA HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA