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The map label for this gene is 148242211

Identifier: 148242211

GI number: 148242211

Start: 981151

End: 982827

Strand: Direct

Name: 148242211

Synonym: SynRCC307_1112

Alternate gene names: NA

Gene position: 981151-982827 (Clockwise)

Preceding gene: 148242206

Following gene: 148242212

Centisome position: 44.1

GC content: 64.4

Gene sequence:

>1677_bases
TTGAAGGGTGCTGCTGCTGGTTGCGCCCCCGTGATCCGCGTTCACCAGATCGCCCTGCCGCTGGATCACCCGCCCGAGGC
GTTGCCCAAAGCGGTGGCCAAGCGCTTGAAGCTGCCGCTCGAGGCCCTCGGCGAGCTGCAGCTGTTTCGCCGCAGCGTGG
ATGCCCGCCACAAGGGCGCCATTGAGCTGGTTTACAGCGTTGATGTGCCGGTGGCCGATGAAGCCGCGGTGCTCGGCAAG
CTGCGCCGTGATTCGCGGGTGATGGCCACCCCCGATCCCTTGGTGCGCCCATCGATCCCGGCGCCTGCTGCCTATGCCAA
TGGCCGCAGGCCCCGGCCGGTGGTGGTGGGTGCCGGGCCCTGCGGCTATTTCGCGGCTTTGTTTTTGGCCCAGCAGGGCT
ACCGGCCGCTTTTGCTGGAGCGCGGCAAGCCGGTGAAGCAGCGCACCGCCGACACCTTTGGCTTTTGGAAAGGGCGCCTG
CCGTTTAATCCGGCCTCCAATGCCCAGTTCGGTGAAGGCGGAGCGGGCACCTTCTCCGACGGCAAGCTCTATTCCGGCGT
CAAGGAATCCAAGCGCCATGGCCGTTGGGTGTTAGAGGAGCTGGTGGAATCGGGCGCCAATCCCGAAATCCTGGTGCTCA
ACAAGCCCCACATCGGCACCTTCAAGCTGGTGGGGGTGGTGCGTCAGCTGCGTCAGCGCATCACCGATCTTGGTGGTGAG
GTGCGCTTTGAGCATCACGTCACTGGTGTGGAGCTATCACCGGGCACACGCCAACTCAAGGCGTTGACCTTGGCCACAGG
CGAGCGCATTGAAACCGATGCGGCTGTGTTTGCCGTGGGCCACAGCTCGCGCGACACCTTTGCCTTGTTGCATGGCCAGG
GCGTGGCGATGGAGCCCAAGCCCTTCTCGATCGGCTTTCGCATCGAGCATCCCCAGCCCTTGATCGATCAGGCCCGTTGG
GGCGAGCACGCCGGCCACCCGATCCTCGGGGCAGCCGATTACAAGCTGGTGCACCACGCCAGCAATGGCCGCAGCGTCTA
CAGCTTCTGCATGTGCCCGGGCGGGCTGGTGGTGGGGGCCACCTCAGAAGAGGGCCGGGTGGTCACCAATGGCATGAGCC
AATACAGCCGCAATGAACGCAATGCCAATAGCGGCATCGTTGTGGCGATCACTCCCGACGACTACCCCGGGGGACCCTTG
GCTGGTGTTGATTTCCAGCGCGAGCTCGAATCACGCGCCTTTGTGCTGGGAGGCAGTAACTACAAAGCACCAGCCCAGCG
CTTGGCTGATTTCCTGGCCGCCAAGCCCAGCAGCGATCTCGGCAGCGGCCGTCCTTCCTATGCCCCTGGCGTCACGCCCA
CTGATCTCTCAACAGCCCTGCCGGAGTTTGCGATTGAGGCGATCCGCGAGGCCTTGCCCGCCTTTGCCAAACAGATCCCT
GGTTTCGATCACCCCGATGCGGTGCTCACCGGCGTTGAAACCCGCACTAGCTCACCGCTCCGCATTACGCGCGGCATTGA
TCTGCAGAGCACCAACACCCCAGGGCTCTTCCCGGCTGGTGAAGGCGCTGGGTTTGCCGGCGGAATCCTTTCAGCTGGCA
TCGATGGACTACGCGTTGGGGAAGCCGTGGCGCGCCATCTCAGCGGTTTGCTGCAGGCCCAGCAGGCCAGCCAGTAG

Upstream 100 bases:

>100_bases
ACCAGCAGTCCAGCCGCGGGTTTCAACCAAGAGAGGCCCATGGCAGCGTTGCTGGTGGTGTTGATGTAGCAGGGATTCGC
AGCGGCTGCCGCCTGCCAAA

Downstream 100 bases:

>100_bases
CGGCTGGATTTTTTGCGCTAGCGCGAGTGTTGTTTGTAAACTGGGTGGAACTGCTCAAGTTCGCCAAAGAGTGATCACGG
CCACCACCGGTGTGTGTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MKGAAAGCAPVIRVHQIALPLDHPPEALPKAVAKRLKLPLEALGELQLFRRSVDARHKGAIELVYSVDVPVADEAAVLGK
LRRDSRVMATPDPLVRPSIPAPAAYANGRRPRPVVVGAGPCGYFAALFLAQQGYRPLLLERGKPVKQRTADTFGFWKGRL
PFNPASNAQFGEGGAGTFSDGKLYSGVKESKRHGRWVLEELVESGANPEILVLNKPHIGTFKLVGVVRQLRQRITDLGGE
VRFEHHVTGVELSPGTRQLKALTLATGERIETDAAVFAVGHSSRDTFALLHGQGVAMEPKPFSIGFRIEHPQPLIDQARW
GEHAGHPILGAADYKLVHHASNGRSVYSFCMCPGGLVVGATSEEGRVVTNGMSQYSRNERNANSGIVVAITPDDYPGGPL
AGVDFQRELESRAFVLGGSNYKAPAQRLADFLAAKPSSDLGSGRPSYAPGVTPTDLSTALPEFAIEAIREALPAFAKQIP
GFDHPDAVLTGVETRTSSPLRITRGIDLQSTNTPGLFPAGEGAGFAGGILSAGIDGLRVGEAVARHLSGLLQAQQASQ

Sequences:

>Translated_558_residues
MKGAAAGCAPVIRVHQIALPLDHPPEALPKAVAKRLKLPLEALGELQLFRRSVDARHKGAIELVYSVDVPVADEAAVLGK
LRRDSRVMATPDPLVRPSIPAPAAYANGRRPRPVVVGAGPCGYFAALFLAQQGYRPLLLERGKPVKQRTADTFGFWKGRL
PFNPASNAQFGEGGAGTFSDGKLYSGVKESKRHGRWVLEELVESGANPEILVLNKPHIGTFKLVGVVRQLRQRITDLGGE
VRFEHHVTGVELSPGTRQLKALTLATGERIETDAAVFAVGHSSRDTFALLHGQGVAMEPKPFSIGFRIEHPQPLIDQARW
GEHAGHPILGAADYKLVHHASNGRSVYSFCMCPGGLVVGATSEEGRVVTNGMSQYSRNERNANSGIVVAITPDDYPGGPL
AGVDFQRELESRAFVLGGSNYKAPAQRLADFLAAKPSSDLGSGRPSYAPGVTPTDLSTALPEFAIEAIREALPAFAKQIP
GFDHPDAVLTGVETRTSSPLRITRGIDLQSTNTPGLFPAGEGAGFAGGILSAGIDGLRVGEAVARHLSGLLQAQQASQ
>Mature_558_residues
MKGAAAGCAPVIRVHQIALPLDHPPEALPKAVAKRLKLPLEALGELQLFRRSVDARHKGAIELVYSVDVPVADEAAVLGK
LRRDSRVMATPDPLVRPSIPAPAAYANGRRPRPVVVGAGPCGYFAALFLAQQGYRPLLLERGKPVKQRTADTFGFWKGRL
PFNPASNAQFGEGGAGTFSDGKLYSGVKESKRHGRWVLEELVESGANPEILVLNKPHIGTFKLVGVVRQLRQRITDLGGE
VRFEHHVTGVELSPGTRQLKALTLATGERIETDAAVFAVGHSSRDTFALLHGQGVAMEPKPFSIGFRIEHPQPLIDQARW
GEHAGHPILGAADYKLVHHASNGRSVYSFCMCPGGLVVGATSEEGRVVTNGMSQYSRNERNANSGIVVAITPDDYPGGPL
AGVDFQRELESRAFVLGGSNYKAPAQRLADFLAAKPSSDLGSGRPSYAPGVTPTDLSTALPEFAIEAIREALPAFAKQIP
GFDHPDAVLTGVETRTSSPLRITRGIDLQSTNTPGLFPAGEGAGFAGGILSAGIDGLRVGEAVARHLSGLLQAQQASQ

Specific function: Unknown

COG id: COG2509

COG function: function code R; Uncharacterized FAD-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 59321; Mature: 59321

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGAAAGCAPVIRVHQIALPLDHPPEALPKAVAKRLKLPLEALGELQLFRRSVDARHKGA
CCCCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
IELVYSVDVPVADEAAVLGKLRRDSRVMATPDPLVRPSIPAPAAYANGRRPRPVVVGAGP
EEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHCCCCCCCEEEEECCC
CGYFAALFLAQQGYRPLLLERGKPVKQRTADTFGFWKGRLPFNPASNAQFGEGGAGTFSD
HHHHHHHHHHHCCCCCHHHCCCCCHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GKLYSGVKESKRHGRWVLEELVESGANPEILVLNKPHIGTFKLVGVVRQLRQRITDLGGE
CHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC
VRFEHHVTGVELSPGTRQLKALTLATGERIETDAAVFAVGHSSRDTFALLHGQGVAMEPK
EEEEEEEEEEEECCCCHHEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCEECCC
PFSIGFRIEHPQPLIDQARWGEHAGHPILGAADYKLVHHASNGRSVYSFCMCPGGLVVGA
CEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEC
TSEEGRVVTNGMSQYSRNERNANSGIVVAITPDDYPGGPLAGVDFQRELESRAFVLGGSN
CCCCCEEEECCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCEEEEECCC
YKAPAQRLADFLAAKPSSDLGSGRPSYAPGVTPTDLSTALPEFAIEAIREALPAFAKQIP
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GFDHPDAVLTGVETRTSSPLRITRGIDLQSTNTPGLFPAGEGAGFAGGILSAGIDGLRVG
CCCCCHHHEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHH
EAVARHLSGLLQAQQASQ
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGAAAGCAPVIRVHQIALPLDHPPEALPKAVAKRLKLPLEALGELQLFRRSVDARHKGA
CCCCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
IELVYSVDVPVADEAAVLGKLRRDSRVMATPDPLVRPSIPAPAAYANGRRPRPVVVGAGP
EEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHCCCCCCCEEEEECCC
CGYFAALFLAQQGYRPLLLERGKPVKQRTADTFGFWKGRLPFNPASNAQFGEGGAGTFSD
HHHHHHHHHHHCCCCCHHHCCCCCHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GKLYSGVKESKRHGRWVLEELVESGANPEILVLNKPHIGTFKLVGVVRQLRQRITDLGGE
CHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC
VRFEHHVTGVELSPGTRQLKALTLATGERIETDAAVFAVGHSSRDTFALLHGQGVAMEPK
EEEEEEEEEEEECCCCHHEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCEECCC
PFSIGFRIEHPQPLIDQARWGEHAGHPILGAADYKLVHHASNGRSVYSFCMCPGGLVVGA
CEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEC
TSEEGRVVTNGMSQYSRNERNANSGIVVAITPDDYPGGPLAGVDFQRELESRAFVLGGSN
CCCCCEEEECCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCEEEEECCC
YKAPAQRLADFLAAKPSSDLGSGRPSYAPGVTPTDLSTALPEFAIEAIREALPAFAKQIP
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GFDHPDAVLTGVETRTSSPLRITRGIDLQSTNTPGLFPAGEGAGFAGGILSAGIDGLRVG
CCCCCHHHEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHH
EAVARHLSGLLQAQQASQ
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396545 [H]