Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242170

Identifier: 148242170

GI number: 148242170

Start: 962130

End: 962630

Strand: Direct

Name: 148242170

Synonym: SynRCC307_1071

Alternate gene names: NA

Gene position: 962130-962630 (Clockwise)

Preceding gene: 148242169

Following gene: 148242173

Centisome position: 43.24

GC content: 56.09

Gene sequence:

>501_bases
ATGGATAAAGCTGAGAGGGTGCAGCAGCTGTGCAGCGAGCACAGTCAGGAATTGAAGGGTTTGGCGCTCGATGTCTGCAG
CCATGGCCGCTGGGACATGAACCTTCCAGTGGCTGTGATCGATGCGCGCAAGACGCCCCATCGCTTTCACATCTCAGCGG
TGGGCACCATCGGCAATATTTTGCGGGTGTCCACCACGGCCGATAACCCGTTGATGCAGCAGCTCTTTGAGCTCTATGAA
CAGCAAGGCTCGGATGCTGCTCTTGAGCACATGCTCAACGATGAGCAGAACGGCGATGAATTCGCCCAACTCTTTGAGAC
CTACAAAGAGGAGCGTCGCCTCGGTTCACCGCTGTGGTCAGCATCGGATGCCGCCGGTTTTGTGGTGAAGTCGAAAGAGG
CGTTTGATGATCAAGAGCTCGCCATCGTTGCTCTGCTCCCTGGTAATCCCTACGACCTGGTGTCGTTTGGGATTCCCTGG
GCTTTTTATGGCGGTCGGTAG

Upstream 100 bases:

>100_bases
GATAAGTCGGTTAAGCCCCAGGCCCGTTTCAGATCGGCCCCTGGTGATCAGCTGTAAACCAGCATGAACAGCCCTGTGAG
GCCAGGGCCGGCTGGTTGGC

Downstream 100 bases:

>100_bases
AACGCTATGGCGTATTCGCAAGCCAACAAAAAGCCCCCGCGGTGGCGGGGGCTGTGAGCTTCAGCGGTAGACGCGCACCC
GGGTGCCTGCCGGACCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MDKAERVQQLCSEHSQELKGLALDVCSHGRWDMNLPVAVIDARKTPHRFHISAVGTIGNILRVSTTADNPLMQQLFELYE
QQGSDAALEHMLNDEQNGDEFAQLFETYKEERRLGSPLWSASDAAGFVVKSKEAFDDQELAIVALLPGNPYDLVSFGIPW
AFYGGR

Sequences:

>Translated_166_residues
MDKAERVQQLCSEHSQELKGLALDVCSHGRWDMNLPVAVIDARKTPHRFHISAVGTIGNILRVSTTADNPLMQQLFELYE
QQGSDAALEHMLNDEQNGDEFAQLFETYKEERRLGSPLWSASDAAGFVVKSKEAFDDQELAIVALLPGNPYDLVSFGIPW
AFYGGR
>Mature_166_residues
MDKAERVQQLCSEHSQELKGLALDVCSHGRWDMNLPVAVIDARKTPHRFHISAVGTIGNILRVSTTADNPLMQQLFELYE
QQGSDAALEHMLNDEQNGDEFAQLFETYKEERRLGSPLWSASDAAGFVVKSKEAFDDQELAIVALLPGNPYDLVSFGIPW
AFYGGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18540; Mature: 18540

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKAERVQQLCSEHSQELKGLALDVCSHGRWDMNLPVAVIDARKTPHRFHISAVGTIGNI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCC
LRVSTTADNPLMQQLFELYEQQGSDAALEHMLNDEQNGDEFAQLFETYKEERRLGSPLWS
EEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC
ASDAAGFVVKSKEAFDDQELAIVALLPGNPYDLVSFGIPWAFYGGR
CCCCCCEEEECCCCCCCCCEEEEEEECCCCHHHHHHCCCEEECCCC
>Mature Secondary Structure
MDKAERVQQLCSEHSQELKGLALDVCSHGRWDMNLPVAVIDARKTPHRFHISAVGTIGNI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCC
LRVSTTADNPLMQQLFELYEQQGSDAALEHMLNDEQNGDEFAQLFETYKEERRLGSPLWS
EEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC
ASDAAGFVVKSKEAFDDQELAIVALLPGNPYDLVSFGIPWAFYGGR
CCCCCCEEEECCCCCCCCCEEEEEEECCCCHHHHHHCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA