Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242118

Identifier: 148242118

GI number: 148242118

Start: 932938

End: 933852

Strand: Direct

Name: 148242118

Synonym: SynRCC307_1019

Alternate gene names: NA

Gene position: 932938-933852 (Clockwise)

Preceding gene: 148242112

Following gene: 148242119

Centisome position: 41.93

GC content: 62.3

Gene sequence:

>915_bases
ATGGGCCGCAGCCTGGCCGTGCTTCTTGCTCTCGCCGGTGCGGTGGTTGGCGCGGCTGCCCTGTGGCCACTGCCCCAGGA
GCCGGAGCCGCTGAGTTGGGACCCTCCGCCAGAGCTAATCCCCCCCCAACCCATTGTTCTGCCACCGGCGCGTGAGCAGC
TGGTGGAGTTTCTACCGGATCAGAGCATCCGACTGTTGCGCCCGACTGGCAGAGAGATCACGGTGCGTTACTCCGCTGTG
GTGGCCGATCCTCGATGGGTTGATTTGGCCTTTTACGGCGGTTGGGAGCGGGAACTGGAAGCCAATGAAGACAGCAGTGC
TTTGGCCTTTGTCACAGGGCCCACCTATGAGCGGCAGCAGGGATTCAACGATTTAGGGATCGCCCTGCACGGAGATCTGG
TGCTGGCCAATGGCCAGTGGGATGCCGGCAACCGCGCCGCTGCCCGTCAGCGCGCCTACTGGGCAATTACCACGGGTGGT
GAGCTGGAGTTTGGCTATGGGCGACTGCCCCGGGAAGACTCCAGCCGCTACCGGATCTTTGTGGGCGGCTTGCATGCGTT
CCACCACAGCGAGGCTGTGCCGCCTGAGAGCTACAAGGGCGTTTATCAAGGCATGACCTTGGCGGATGTGCGCATCGTCT
ATGCCTGGCGAGACGATGGCCGCTTGGAGCTGCTGGAAACAGCGGATGGACTGCTGTTTAGCGATCTGGAGTTGCTGGTG
AAAGCCCGCGGTTTCCGCGCCGCTTATTTGCCTGATCACGCCTCAAAATCACGGCTGATCATTCCTGGTCAGAAGTTGTG
GAGTGACGAGCAGGCCCTCTGGGTGAGCGGGGGCCGCCTCGACATCATCCCGCTGCCCTTCATGCTGAAGCTGCAACCCA
GCCGCGCTTGGTATGAGGCCTCCAATCGGCTCTGA

Upstream 100 bases:

>100_bases
GGTGCGATCGAGCCCTTGCAACAGCTGTTGAAAGCGCCGCATTAGCCGCTGCAGATCACTGAGATCTCACCACAATGAAA
CGAGCAACCGCGTTGGGGTG

Downstream 100 bases:

>100_bases
ATTTCGGCTTTATTTCGAGCGCACCCTTGGCGTGGGGTGTGGGGTGGGTGTTGTGCTGGCGCTGCCTGGTGTGCTGTTGG
CGCTACTGGTGCTGTTCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MGRSLAVLLALAGAVVGAAALWPLPQEPEPLSWDPPPELIPPQPIVLPPAREQLVEFLPDQSIRLLRPTGREITVRYSAV
VADPRWVDLAFYGGWERELEANEDSSALAFVTGPTYERQQGFNDLGIALHGDLVLANGQWDAGNRAAARQRAYWAITTGG
ELEFGYGRLPREDSSRYRIFVGGLHAFHHSEAVPPESYKGVYQGMTLADVRIVYAWRDDGRLELLETADGLLFSDLELLV
KARGFRAAYLPDHASKSRLIIPGQKLWSDEQALWVSGGRLDIIPLPFMLKLQPSRAWYEASNRL

Sequences:

>Translated_304_residues
MGRSLAVLLALAGAVVGAAALWPLPQEPEPLSWDPPPELIPPQPIVLPPAREQLVEFLPDQSIRLLRPTGREITVRYSAV
VADPRWVDLAFYGGWERELEANEDSSALAFVTGPTYERQQGFNDLGIALHGDLVLANGQWDAGNRAAARQRAYWAITTGG
ELEFGYGRLPREDSSRYRIFVGGLHAFHHSEAVPPESYKGVYQGMTLADVRIVYAWRDDGRLELLETADGLLFSDLELLV
KARGFRAAYLPDHASKSRLIIPGQKLWSDEQALWVSGGRLDIIPLPFMLKLQPSRAWYEASNRL
>Mature_303_residues
GRSLAVLLALAGAVVGAAALWPLPQEPEPLSWDPPPELIPPQPIVLPPAREQLVEFLPDQSIRLLRPTGREITVRYSAVV
ADPRWVDLAFYGGWERELEANEDSSALAFVTGPTYERQQGFNDLGIALHGDLVLANGQWDAGNRAAARQRAYWAITTGGE
LEFGYGRLPREDSSRYRIFVGGLHAFHHSEAVPPESYKGVYQGMTLADVRIVYAWRDDGRLELLETADGLLFSDLELLVK
ARGFRAAYLPDHASKSRLIIPGQKLWSDEQALWVSGGRLDIIPLPFMLKLQPSRAWYEASNRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33850; Mature: 33719

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRSLAVLLALAGAVVGAAALWPLPQEPEPLSWDPPPELIPPQPIVLPPAREQLVEFLPD
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCC
QSIRLLRPTGREITVRYSAVVADPRWVDLAFYGGWERELEANEDSSALAFVTGPTYERQQ
CCEEEECCCCCEEEEEEEEEEECCCEEEEEEECCCCEEECCCCCCCEEEEEECCCHHHHC
GFNDLGIALHGDLVLANGQWDAGNRAAARQRAYWAITTGGELEFGYGRLPREDSSRYRIF
CCCCCCEEEECCEEEECCCCCCCCHHHHHCCEEEEEEECCEEEECCCCCCCCCCCCEEEE
VGGLHAFHHSEAVPPESYKGVYQGMTLADVRIVYAWRDDGRLELLETADGLLFSDLELLV
EECEEHHHCCCCCCCHHHHHHHCCCEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHH
KARGFRAAYLPDHASKSRLIIPGQKLWSDEQALWVSGGRLDIIPLPFMLKLQPSRAWYEA
HHCCCEEEECCCCCCCCEEEECCHHHCCCCCEEEEECCEEEEEECCEEEEECCCCHHHHH
SNRL
CCCC
>Mature Secondary Structure 
GRSLAVLLALAGAVVGAAALWPLPQEPEPLSWDPPPELIPPQPIVLPPAREQLVEFLPD
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCC
QSIRLLRPTGREITVRYSAVVADPRWVDLAFYGGWERELEANEDSSALAFVTGPTYERQQ
CCEEEECCCCCEEEEEEEEEEECCCEEEEEEECCCCEEECCCCCCCEEEEEECCCHHHHC
GFNDLGIALHGDLVLANGQWDAGNRAAARQRAYWAITTGGELEFGYGRLPREDSSRYRIF
CCCCCCEEEECCEEEECCCCCCCCHHHHHCCEEEEEEECCEEEECCCCCCCCCCCCEEEE
VGGLHAFHHSEAVPPESYKGVYQGMTLADVRIVYAWRDDGRLELLETADGLLFSDLELLV
EECEEHHHCCCCCCCHHHHHHHCCCEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHH
KARGFRAAYLPDHASKSRLIIPGQKLWSDEQALWVSGGRLDIIPLPFMLKLQPSRAWYEA
HHCCCEEEECCCCCCCCEEEECCHHHCCCCCEEEEECCEEEEEECCEEEEECCCCHHHHH
SNRL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA