Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242110

Identifier: 148242110

GI number: 148242110

Start: 924100

End: 925020

Strand: Direct

Name: 148242110

Synonym: SynRCC307_1011

Alternate gene names: NA

Gene position: 924100-925020 (Clockwise)

Preceding gene: 148242105

Following gene: 148242112

Centisome position: 41.53

GC content: 62.65

Gene sequence:

>921_bases
ATGGAAATCCTGATGATGGGCGGCACCCGCTTTGTTGGCCGGCCGCTGGTGGGTCATTTGTTGCGCTCTGGTCACCAGGT
CTGCCTGTTCACCCGCGGTAAGCAGCCCCTGCCCGAGGGGGTGGAACACATCCGTGGCGATCGCAGTGATGCTGAGGGCT
TGGCAGCTCTCAAGGGCCGCCAGTTCGATGTGATCGTCGACAGCTCTGGCCGCACCCTGACGGATACGCAAAGCGTTGTG
GCCATCACAGGCGCCCCGCGCCATCGCCTCGTCTATGTGAGCTCAGCTGGCGTGTATGCCGACAACGCCCGCTTGCCGCT
CGATGAGTCGGCTCCCACCGACCCGGCCAGCCGCCACGCTGGTAAGGCGGAAACCGAAACCTGGTTGCAGGCCGAAGGCA
TTCCCTTCACCAGCTTTCGCCCGACCTACATCTACGGGCCTGGGAACTACAACCCCGTCGAGAACTGGTTTTTTGATCGC
ATCGTGCACGGACGCCCTGTGCCCATCCCCGGTGATGGAACCACCATCACCCAGCTCGGCCATGTGGAGGATCTGGCTAC
CGCCATGGCCCGTTGCCTCGAGGTCGATGCTGCCGCTAATCGCATCTACAACTGCACCGATACCCATGGGGTGACGTTCC
GCGGTCTGGTGGCTGCTGCTGCGCGCGCCTGCGGCAAAGATCCAGAGCAGGTGGAGCTGCGCAGCTTTGATCCCAGCGGC
CTCGATCCCAAAGCCCGCAAAGCGTTCCCGCTGCGGTTGACCCACTTTCTGACCTCAGTGGAGCGTTTGCGCAAGGAATT
GGCCTGGACGCCACAGTTTGATCTCGAGGCCGGTTTGCGCGATAGCTACAGCAAAGACCACAGCCAGCGGCCCGCCGCTG
ATGTGGATTTCAGCCGCGACGACAGCTTGTTTCAGGCCTGA

Upstream 100 bases:

>100_bases
TCGATGGCGGGAATGATCTGCATGGGGCAGGGCGATCACTGCCGCCATCCTCACCAACGGCCGTCAGCGCAGAATGCTGC
GGCATCGCAGCGGGAGAACG

Downstream 100 bases:

>100_bases
CGCGCGTAGCCAACCGCTGACCACAGGGCAAGGACCAGCGAGGGCCAGAACAGCCACCAACCCAGGCTTTGCAGCCCAGC
AGCCCATGGCCAGGTCGCTG

Product: NAD dependent epimerase/dehydratase

Products: NA

Alternate protein names: Reductase; UDP-Glucose 4-Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; Isoflavone Reductase; Nucleotide Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; Oxidoreductase; DTDP-Glucose 4 6-Dehydratase; NAD Dependent Epimerase/Dehydratase; Nucleoside-Diphosphate-Sugar Epimerases; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NDP-Sugar Oxidoreductase; Nucleotide Sugar Epimerase/Dehydratase; Methyltransferase FkbM; Sugar Dehydratase; Dtdpglucose 4 6-Dehydratase-Like Protein; NAD Dependent Epimerase/Dehydratase Family

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MEILMMGGTRFVGRPLVGHLLRSGHQVCLFTRGKQPLPEGVEHIRGDRSDAEGLAALKGRQFDVIVDSSGRTLTDTQSVV
AITGAPRHRLVYVSSAGVYADNARLPLDESAPTDPASRHAGKAETETWLQAEGIPFTSFRPTYIYGPGNYNPVENWFFDR
IVHGRPVPIPGDGTTITQLGHVEDLATAMARCLEVDAAANRIYNCTDTHGVTFRGLVAAAARACGKDPEQVELRSFDPSG
LDPKARKAFPLRLTHFLTSVERLRKELAWTPQFDLEAGLRDSYSKDHSQRPAADVDFSRDDSLFQA

Sequences:

>Translated_306_residues
MEILMMGGTRFVGRPLVGHLLRSGHQVCLFTRGKQPLPEGVEHIRGDRSDAEGLAALKGRQFDVIVDSSGRTLTDTQSVV
AITGAPRHRLVYVSSAGVYADNARLPLDESAPTDPASRHAGKAETETWLQAEGIPFTSFRPTYIYGPGNYNPVENWFFDR
IVHGRPVPIPGDGTTITQLGHVEDLATAMARCLEVDAAANRIYNCTDTHGVTFRGLVAAAARACGKDPEQVELRSFDPSG
LDPKARKAFPLRLTHFLTSVERLRKELAWTPQFDLEAGLRDSYSKDHSQRPAADVDFSRDDSLFQA
>Mature_306_residues
MEILMMGGTRFVGRPLVGHLLRSGHQVCLFTRGKQPLPEGVEHIRGDRSDAEGLAALKGRQFDVIVDSSGRTLTDTQSVV
AITGAPRHRLVYVSSAGVYADNARLPLDESAPTDPASRHAGKAETETWLQAEGIPFTSFRPTYIYGPGNYNPVENWFFDR
IVHGRPVPIPGDGTTITQLGHVEDLATAMARCLEVDAAANRIYNCTDTHGVTFRGLVAAAARACGKDPEQVELRSFDPSG
LDPKARKAFPLRLTHFLTSVERLRKELAWTPQFDLEAGLRDSYSKDHSQRPAADVDFSRDDSLFQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33598; Mature: 33598

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILMMGGTRFVGRPLVGHLLRSGHQVCLFTRGKQPLPEGVEHIRGDRSDAEGLAALKGR
CEEEEECCCHHHCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHCCC
QFDVIVDSSGRTLTDTQSVVAITGAPRHRLVYVSSAGVYADNARLPLDESAPTDPASRHA
EEEEEECCCCCEEECCCCEEEEECCCCEEEEEEECCCEEECCCCCCCCCCCCCCHHHHCC
GKAETETWLQAEGIPFTSFRPTYIYGPGNYNPVENWFFDRIVHGRPVPIPGDGTTITQLG
CCCHHHHHHEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEHHC
HVEDLATAMARCLEVDAAANRIYNCTDTHGVTFRGLVAAAARACGKDPEQVELRSFDPSG
CHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCC
LDPKARKAFPLRLTHFLTSVERLRKELAWTPQFDLEAGLRDSYSKDHSQRPAADVDFSRD
CCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC
DSLFQA
CHHHCC
>Mature Secondary Structure
MEILMMGGTRFVGRPLVGHLLRSGHQVCLFTRGKQPLPEGVEHIRGDRSDAEGLAALKGR
CEEEEECCCHHHCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHCCC
QFDVIVDSSGRTLTDTQSVVAITGAPRHRLVYVSSAGVYADNARLPLDESAPTDPASRHA
EEEEEECCCCCEEECCCCEEEEECCCCEEEEEEECCCEEECCCCCCCCCCCCCCHHHHCC
GKAETETWLQAEGIPFTSFRPTYIYGPGNYNPVENWFFDRIVHGRPVPIPGDGTTITQLG
CCCHHHHHHEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEHHC
HVEDLATAMARCLEVDAAANRIYNCTDTHGVTFRGLVAAAARACGKDPEQVELRSFDPSG
CHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCC
LDPKARKAFPLRLTHFLTSVERLRKELAWTPQFDLEAGLRDSYSKDHSQRPAADVDFSRD
CCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC
DSLFQA
CHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA