| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is apt
Identifier: 148242065
GI number: 148242065
Start: 884506
End: 885039
Strand: Direct
Name: apt
Synonym: SynRCC307_0966
Alternate gene names: 148242065
Gene position: 884506-885039 (Clockwise)
Preceding gene: 148242060
Following gene: 148242070
Centisome position: 39.75
GC content: 63.11
Gene sequence:
>534_bases ATGGCCGAGAGCCTTGAGCAGCAACTACGTGCCCTGGTCAGGGATGTGCCGGATTTCCCGAAGCCAGGAATTTTGTTCCG TGACCTCACACCGGTCATGCGCGATCCCCAGGCTTGGAAGCAAGTGATGGAGGGGATGCAGCAGTCTTTGGCTGGCTTGC AGCCTGAGGTGATTGTGGGGATTGAGGCGCGGGGCTTCATCGTTGGCACCAGCCTGGCGATGACGATGGGCCTGGGCTTT GTGCCCGTGCGTAAGCCCGGCAAACTCCCTGGTCCGATCACTGCTGTGGACTATGCCCTCGAGTACGGCAGCGACCGGCT GGAGATCCAAGAGGGGGCCTTGAGCGGCTGCCAGCGCGTGTTGGTGGTCGATGATCTGCTGGCCACTGGCGGCACTGCGG CAGCCTGCGCGGAACTGGTGAGCCGAGCTGGCGGGGCCGTGTGCGGTTACGGCTTTGTGGCTGAGCTCACAGCCCTTGGC GGCCGCAGCAAACTCCCCGGAGGCGTGCTGGTGGAGTCACTGATTCATTACTGA
Upstream 100 bases:
>100_bases GTGGCAGGCGCTGCTGTTGCGATCAAGGACCGGGGGCAATGGCTGAGATGATGCCAGTTGAGGCCTTGTGCCGTCACCTC TTTGTTAGGAGCCTCCATCC
Downstream 100 bases:
>100_bases GGTCAGCTTTGACCGTCTTGCCAATCGAGCACTTGGTCGAGTTGTCCCAGGTTGAGCAAACCAAAACGCCAGAGGGTCAC CGGCAGCGGGGCCTGCTCTT
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MAESLEQQLRALVRDVPDFPKPGILFRDLTPVMRDPQAWKQVMEGMQQSLAGLQPEVIVGIEARGFIVGTSLAMTMGLGF VPVRKPGKLPGPITAVDYALEYGSDRLEIQEGALSGCQRVLVVDDLLATGGTAAACAELVSRAGGAVCGYGFVAELTALG GRSKLPGGVLVESLIHY
Sequences:
>Translated_177_residues MAESLEQQLRALVRDVPDFPKPGILFRDLTPVMRDPQAWKQVMEGMQQSLAGLQPEVIVGIEARGFIVGTSLAMTMGLGF VPVRKPGKLPGPITAVDYALEYGSDRLEIQEGALSGCQRVLVVDDLLATGGTAAACAELVSRAGGAVCGYGFVAELTALG GRSKLPGGVLVESLIHY >Mature_176_residues AESLEQQLRALVRDVPDFPKPGILFRDLTPVMRDPQAWKQVMEGMQQSLAGLQPEVIVGIEARGFIVGTSLAMTMGLGFV PVRKPGKLPGPITAVDYALEYGSDRLEIQEGALSGCQRVLVVDDLLATGGTAAACAELVSRAGGAVCGYGFVAELTALGG RSKLPGGVLVESLIHY
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family
Homologues:
Organism=Homo sapiens, GI4502171, Length=180, Percent_Identity=46.1111111111111, Blast_Score=144, Evalue=4e-35, Organism=Homo sapiens, GI71773201, Length=133, Percent_Identity=48.1203007518797, Blast_Score=123, Evalue=1e-28, Organism=Escherichia coli, GI1786675, Length=177, Percent_Identity=44.0677966101695, Blast_Score=146, Evalue=9e-37, Organism=Caenorhabditis elegans, GI17509087, Length=179, Percent_Identity=41.8994413407821, Blast_Score=140, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6323619, Length=172, Percent_Identity=44.7674418604651, Blast_Score=138, Evalue=4e-34, Organism=Saccharomyces cerevisiae, GI6320649, Length=180, Percent_Identity=33.8888888888889, Blast_Score=103, Evalue=2e-23, Organism=Drosophila melanogaster, GI17136334, Length=178, Percent_Identity=42.6966292134831, Blast_Score=137, Evalue=5e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APT_SYNR3 (A5GSL0)
Other databases:
- EMBL: CT978603 - RefSeq: YP_001227222.1 - ProteinModelPortal: A5GSL0 - SMR: A5GSL0 - STRING: A5GSL0 - GeneID: 5157901 - GenomeReviews: CT978603_GR - KEGG: syr:SynRCC307_0966 - eggNOG: COG0503 - HOGENOM: HBG703830 - OMA: GILFYDI - ProtClustDB: PRK02304 - GO: GO:0005737 - HAMAP: MF_00004 - InterPro: IPR005764 - InterPro: IPR000836 - TIGRFAMs: TIGR01090
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.7
Molecular weight: Translated: 18654; Mature: 18523
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESLEQQLRALVRDVPDFPKPGILFRDLTPVMRDPQAWKQVMEGMQQSLAGLQPEVIVG CCHHHHHHHHHHHHHCCCCCCCCEEHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCCEEEE IEARGFIVGTSLAMTMGLGFVPVRKPGKLPGPITAVDYALEYGSDRLEIQEGALSGCQRV ECCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH LVVDDLLATGGTAAACAELVSRAGGAVCGYGFVAELTALGGRSKLPGGVLVESLIHY HHHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure AESLEQQLRALVRDVPDFPKPGILFRDLTPVMRDPQAWKQVMEGMQQSLAGLQPEVIVG CHHHHHHHHHHHHHCCCCCCCCEEHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCCEEEE IEARGFIVGTSLAMTMGLGFVPVRKPGKLPGPITAVDYALEYGSDRLEIQEGALSGCQRV ECCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH LVVDDLLATGGTAAACAELVSRAGGAVCGYGFVAELTALGGRSKLPGGVLVESLIHY HHHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA